DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and MSB3

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_014106.1 Gene:MSB3 / 855423 SGDID:S000005237 Length:633 Species:Saccharomyces cerevisiae


Alignment Length:462 Identity:89/462 - (19%)
Similarity:163/462 - (35%) Gaps:149/462 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 DSGNSTPADRQKSAMKCRHFSVDLSQMRS--LRLFFNDDNCTSGQL---VIASRESQYKILHFHY 300
            |:||.                 ||.::.|  |.|..:|||....:|   ..|:..:...|.:.|:
Yeast   108 DNGNE-----------------DLEEVHSDDLDLVPDDDNRQRVELEGAASATSANSNGINNTHF 155

  Fly   301 GGLDHLAQVLHQWHCFLHNITSETGQDKFDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYG 365
            .......|         :|..||...||:.:.|..:.|.|...                    :.
Yeast   156 DRYGFKKQ---------NNYISEAEYDKWWVEYSQYCVRRKHK--------------------WQ 191

  Fly   366 TLLNEKG-QIEDD-------------LLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAV 416
            .||.:.| .:.||             ..:||     |:....|...|      :.|:...|.   
Yeast   192 LLLEKSGLPVTDDSPSRFPSKSERLKRYVRK-----GIPAEWRGNAW------WHFARGQEK--- 242

  Fly   417 LMDIKRQEYEEITR--KRLYSMSPEQQIHFWKTVQ--IVVEKDVVRTDRTNPFFCG-----DDNP 472
             ::..:..|.::.|  |::...:|.:     |.||  .::|:|:.||...|..|..     :..|
Yeast   243 -LNKNKGVYSQLLRKMKQIKKQNPNE-----KQVQDLDIIERDLNRTFPDNIHFQSSLHNKEGPP 301

  Fly   473 NTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQRAFFVCTPTDRDVD 537
            ..:.::.:|:.|::||..:.|.|.| :.||.:|....:|...||..|.:          |.|.:.
Yeast   302 IIKSLRRVLVAFSLYNPKIGYCQSM-NFLAGLLLLFLDEERAFWMLVII----------TSRYLP 355

  Fly   538 --HNLS-----------------YLREL---IRIMLPHFYKHLEQHNDSMELL--------FCHR 572
              ||::                 |:.|:   |:..:.|..|:.:..:.|.:.:        |.:|
Yeast   356 GVHNINLEGVNIDQGVLMLCVKEYIPEVWSYIKPSIDHHQKNNKTFSPSNKKVLFNMQKNEFLYR 420

  Fly   573 ----------WLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPD 627
                      |.:.||.........:|:|:..:  |...:|...:.||::.:...|:  ..::|.
Yeast   421 LPPITLCTASWFMSCFVGVVPIETTLRIWDCLF--YEESHFLFKVSLAVLKLSEHDL--SKIKPR 481

  Fly   628 EMLLHFS 634
            ...|::|
Yeast   482 NNSLNYS 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 54/279 (19%)
MSB3NP_014106.1 COG5210 15..540 CDD:227535 89/462 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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