DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and MSB4

DIOPT Version :10

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_014529.1 Gene:MSB4 / 854037 SGDID:S000005472 Length:492 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:59/301 - (19%)
Similarity:109/301 - (36%) Gaps:69/301 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 RKTVWP-FLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRL----------YSMSPEQQIH---- 443
            ||..|. ||||  :......|..::...:..|..:..||.:          |....::|:.    
Yeast   110 RKKKWENFLLK--NKIELHNDNPLVYPARTDELSKFVRKGIPAEWRGNAWWYFAGGQRQLDANVG 172

  Fly   444 --------------FWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTE-----VMKNILLNFAVYNT 489
                          ..|.:: .:|:|:.||...|..|..:...|.|     .::.:|:.|:||:.
Yeast   173 VYDRLKSDCREGAVSGKDME-AIERDLYRTFPDNIHFHKESFQNGEPAIIRSLRRVLMAFSVYDK 236

  Fly   490 GMSYSQGMSDLLAPVLCEVQNESETFWCFV---GLMQRAFFVCTPTDRDVDHNLSYLRELIRIML 551
            .:.|.|.|:.|:..:|..:: |.:.||..|   |......:.......:||..:..|  .|:..|
Yeast   237 TIGYCQSMNFLVGLLLLFME-EEKAFWMLVIITGKYLPGVYESDLEGANVDQGVLVL--CIKEYL 298

  Fly   552 PHFYKHLEQH----NDSME-----------------LLFC-HRWLLLCFKREFTEAVVIRMWEAC 594
            |..:.|:|..    |.|.:                 |..| ..|.:.||.........:|:|:..
Yeast   299 PEIWSHIESSYMNGNGSTDQISGPASGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCL 363

  Fly   595 WSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSS 635
            :  |...:|...:.|.|:.:...:.:..  :..::...:||
Yeast   364 F--YEESHFLFKVALGILKLSESEFLES--KSQKLFRQYSS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 57/282 (20%)
MSB4NP_014529.1 COG5210 <53..461 CDD:227535 59/301 (20%)

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