DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and MSB4

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_014529.1 Gene:MSB4 / 854037 SGDID:S000005472 Length:492 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:59/301 - (19%)
Similarity:109/301 - (36%) Gaps:69/301 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 RKTVWP-FLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRL----------YSMSPEQQIH---- 443
            ||..|. ||||  :......|..::...:..|..:..||.:          |....::|:.    
Yeast   110 RKKKWENFLLK--NKIELHNDNPLVYPARTDELSKFVRKGIPAEWRGNAWWYFAGGQRQLDANVG 172

  Fly   444 --------------FWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTE-----VMKNILLNFAVYNT 489
                          ..|.:: .:|:|:.||...|..|..:...|.|     .::.:|:.|:||:.
Yeast   173 VYDRLKSDCREGAVSGKDME-AIERDLYRTFPDNIHFHKESFQNGEPAIIRSLRRVLMAFSVYDK 236

  Fly   490 GMSYSQGMSDLLAPVLCEVQNESETFWCFV---GLMQRAFFVCTPTDRDVDHNLSYLRELIRIML 551
            .:.|.|.|:.|:..:|..:: |.:.||..|   |......:.......:||..:..|  .|:..|
Yeast   237 TIGYCQSMNFLVGLLLLFME-EEKAFWMLVIITGKYLPGVYESDLEGANVDQGVLVL--CIKEYL 298

  Fly   552 PHFYKHLEQH----NDSME-----------------LLFC-HRWLLLCFKREFTEAVVIRMWEAC 594
            |..:.|:|..    |.|.:                 |..| ..|.:.||.........:|:|:..
Yeast   299 PEIWSHIESSYMNGNGSTDQISGPASGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCL 363

  Fly   595 WSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSS 635
            :  |...:|...:.|.|:.:...:.:..  :..::...:||
Yeast   364 F--YEESHFLFKVALGILKLSESEFLES--KSQKLFRQYSS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 57/282 (20%)
MSB4NP_014529.1 COG5210 <53..461 CDD:227535 59/301 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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