DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBC1D16 and MDR1

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_011614.1 Gene:MDR1 / 852992 SGDID:S000003332 Length:950 Species:Saccharomyces cerevisiae


Alignment Length:532 Identity:98/532 - (18%)
Similarity:182/532 - (34%) Gaps:140/532 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 IENSNISQSFNCITIRPDSNNCSDCTNGSGVGDGPATDNPKWTTPELLAFKHNLEFPDSGNSTPA 248
            :|::|...||  .|...|....||..|..|...........:.||..|.|:...:          
Yeast    44 LEDTNAEVSF--ATSIKDGKGHSDRVNNKGRKTAYVYSGRLFLTPHFLVFRDAFD---------- 96

  Fly   249 DRQKSAMKCRHFSVDLSQMRSLRLFFNDDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQW 313
              ..|.:...:.|......||                 .|...::.:|...|.|    |:||.|:
Yeast    97 --HSSCVLILNISTIKRVERS-----------------PSESYEFALLVTLYTG----AKVLIQF 138

  Fly   314 HCFLHNITSETGQDKFDL------------------PYRHFMVCRPEVKKSEMH-PDEGDVKKIT 359
            ....:.  ||...||..|                  .|..|::.:..:.|.::. |..|    :.
Yeast   139 IGIRYR--SEQFCDKLKLNLKENIPNAKTLPAFLETSYSEFLIAKNILGKKDITVPRAG----LG 197

  Fly   360 TNFFY---GTLLNEKGQIE----------------DDLLLRKCVFFGGLEKSLRKTVWPF----L 401
            .:|.|   .|::.||.::.                ...:.||.:.. |:...:|..:|..    :
Yeast   198 QHFKYPGNPTMVKEKAKLRLWFDYFRENGRNLAVVQTPMFRKLIRI-GVPNRMRGEIWELCSGAM 261

  Fly   402 LKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHFWKTVQIV--VEKDVVRTDRTNP 464
            ...|:.|.              |||.|..:           :..||.|.:  :|||:.|:  ...
Yeast   262 YMRYANSG--------------EYERILNE-----------NAGKTSQAIDEIEKDLKRS--LPE 299

  Fly   465 FFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQ---RAF 526
            :.........:.::|:|..::..|..:.|.|.|:.::|..|. ..:|.:.|||...|..   ..:
Yeast   300 YSAYQTEEGIQRLRNVLTAYSWKNPDVGYCQAMNIVVAGFLI-FMSEEQAFWCLCNLCDIYVPGY 363

  Fly   527 FVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMW 591
            :..|.....:|..:  ....:...:|..::::.||:..:.::.. .|.|..|.........:|:.
Yeast   364 YSKTMYGTLLDQRV--FESFVEDRMPVLWEYILQHDIQLSVVSL-PWFLSLFFTSMPLEYAVRIM 425

  Fly   592 EACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLL-----HFSSL--AMYMDGQLILRKA 649
            :..:.|.....|.  :.||::.:.|||::..:  .|.|.:     :|.:|  :.:.|...|    
Yeast   426 DIFFMNGSITLFQ--VALAVLKINADDILQAD--DDGMFIAIIKHYFQTLGQSAHPDSSDI---- 482

  Fly   650 RGLLHQYRQLPK 661
                 :|||:.|
Yeast   483 -----KYRQITK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 43/239 (18%)
MDR1NP_011614.1 COG5210 23..531 CDD:227535 98/532 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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