DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and AT5G53570

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001154777.1 Gene:AT5G53570 / 835439 AraportID:AT5G53570 Length:577 Species:Arabidopsis thaliana


Alignment Length:591 Identity:122/591 - (20%)
Similarity:203/591 - (34%) Gaps:215/591 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 CTNGSGVGDG---------PATDNPKWTTPELLAFKHNLEFPDSGNST-----PADRQKSAMKCR 258
            |..|.|.|.|         ||.        ::.|.:.:.....||||:     |:....|.....
plant     5 CYGGGGGGRGLLLLITGKFPAN--------QMKALRRSYTSTSSGNSSSSSSLPSSSSSSLPSSS 61

  Fly   259 HFSVDLSQMRSLRLFFNDDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHNITSE 323
            ..|...|...|   :.|.::.:|....|                  ||..||     |:.|::|.
plant    62 SSSPPSSNSNS---YSNSNSSSSSSSWI------------------HLRSVL-----FVANLSSP 100

  Fly   324 ---TGQDKFDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLL--LRKC 383
               |..|:     |.........:|..:.|.:           :.:|...:|::.|..:  |:| 
plant   101 SSVTSSDR-----RRKSPWSRRKRKWALTPHQ-----------WRSLFTPEGKLRDGGVGFLKK- 148

  Fly   384 VFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRK-------------RLYS 435
            |...|::.|:|..||.|||..|..:||.|:|..:...||:|||::.|:             .|..
plant   149 VRSRGVDPSIRAEVWLFLLGVYDLNSTSEEREAVKTQKRKEYEKLQRRCQMLLKCGNGSTDNLEE 213

  Fly   436 MSPE----QQIHF---WKTVQIVVEKDVV---RTDRTNPFFCGD--------------------D 470
            :..:    |.:.|   :|....:..:|||   .||.::...|.|                    |
plant   214 LPSDEANSQCVRFVDDYKITGPMTSQDVVSALNTDSSDTDSCEDNEDVLLLSSFAHSDEKKPEED 278

  Fly   471 NPNTEVMKN-------------------------------------------------------- 479
            |.|....:|                                                        
plant   279 NSNNNSEENSSLLVAAASEVQVEVAVHEDFSTWQRIIRLDALRADSEWANYSPYSTAITESKARR 343

  Fly   480 --------------------------ILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCF 518
                                      ||..:|:|:..:.|.|||||||:|:|..:..:.|.||||
plant   344 LAESVGLKDYDHLESCRLYHAARLVAILEAYAMYDPEIGYCQGMSDLLSPILAVISEDHEAFWCF 408

  Fly   519 VGLMQRAFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFT 583
            ||.|::|.......:..:...||.:.::|:......||||| :..:.:..|.:|.:|:.|:||.:
plant   409 VGFMKKARHNFRLDEAGIQRQLSIVSKIIKNKDSQLYKHLE-NLQAEDCSFVYRMVLVMFRRELS 472

  Fly   584 EAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYAD------DVVAQNLRPDEMLLHFSSLAMYMDG 642
            ....:.:||..|::.             .|:.|.      ..:.|...|.:.||.::..|:.:..
plant   473 FEQTLCLWEVMWADQ-------------AAIRAGVGKSPWSRIRQQAPPTDDLLLYAIAALVLRR 524

  Fly   643 QLILRK 648
            :||::|
plant   525 KLIIQK 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 76/361 (21%)
AT5G53570NP_001154777.1 TBC <370..486 CDD:214540 40/116 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22957
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2505
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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