DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and AT5G52580

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001190524.1 Gene:AT5G52580 / 835335 AraportID:AT5G52580 Length:690 Species:Arabidopsis thaliana


Alignment Length:711 Identity:188/711 - (26%)
Similarity:325/711 - (45%) Gaps:143/711 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKASSFILGDERLDRKIDIAYEDNEILFCKNNVCIHPPTIARDESDILHNPGYLTCTTKTFVDQY 72
            ::.|:.::..:...|.:...:||..:::.|:||.|||...|.:...     |.|..|.:..|   
plant    22 QQGSASMMRSDSGKRSLQSEHEDAVLIYLKDNVAIHPTQFASERIS-----GRLKLTKQDSV--- 78

  Fly    73 NSAKRPTLLLTWIPNSSLCKYTNLNADDCRGQCNPRSKSPDSRNGYCHVTIPQTIQERDIREEDE 137
                   |.|:|||              .:||.:....|...|:.|....:|.| :.|.||..  
plant    79 -------LFLSWIP--------------YKGQTSNAKLSEKDRSLYTITAVPFT-EVRSIRRH-- 119

  Fly   138 NAADMQELKNELQPLLGGQ------------------AASIDDLTALLKNNPITSVNITISNPQI 184
                        .|.||.|                  ...:.:..|::|.:...:.:....|..|
plant   120 ------------TPALGWQYVIVVLSSGLAFPPLYFYNGGVREFLAMVKQHVFLARSSEDQNVFI 172

  Fly   185 EN---SNISQSFNCITIRPDSNNCSDCTNGSGVGDGPATDNPKWTTPELLAFKHNLEFPDSGNST 246
            .|   |.:.::.:.:.: |.|...:...:...:..|.:::|.:.|:            .|.||..
plant   173 VNDFQSPLQRTLSSLEL-PSSLPVASGQSVYPLDGGSSSENQRRTS------------SDVGNRV 224

  Fly   247 PA------DRQKSAMKCRHFSVDLSQMRSLRLFFNDDNCT------SGQLVIASRESQYKILHFH 299
            .:      .:|||....|..|:.|.:..||...|..|..|      :|...|..|.:...: |.:
plant   225 SSVSQSGFRKQKSHDPTRDLSIHLLEKFSLVTKFARDTTTQLFSENNGFGSIDKRWNNQPV-HSY 288

  Fly   300 YGGLDHLAQVLHQ--WHCFLHNITSETGQ-------------DKFDL--------PYRHFMVCRP 341
            ...|.::|:..|.  .|.:..|...:..:             ||..|        |..|      
plant   289 PEKLSNIAEEKHHEIRHSYSENDLLKDDEISYIDVPADPLEFDKLSLMWGKPRQPPMGH------ 347

  Fly   342 EVKKSEMHPDEGDVK-KITTNFFYGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCY 405
            :.:::::.|   .:| :|:|.:| ..||:.:|::.:...||:.||:||:|..||:.||||||..|
plant   348 KERRNDISP---SIKCRISTEYF-TALLDSEGRVVESKALRERVFYGGIEHQLRREVWPFLLGYY 408

  Fly   406 SFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHF--WKTVQIVVEKDVVRTDRTNPFFCG 468
            ::.||:.:|..|..:||.||..: :::..|:||||...|  ::..:.:::||||||||...::.|
plant   409 AYDSTYAEREYLRSVKRMEYATL-KQQWQSISPEQAKRFTKYRERKGLIDKDVVRTDRAFEYYEG 472

  Fly   469 DDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQRAFFVCTPT- 532
            |||.:...|::|||.::.||..:.|.|||||.|:|:|..:::|||:|||||.||:|    ..|. 
plant   473 DDNLHVNSMRDILLTYSFYNFDLGYCQGMSDYLSPILFVMEDESESFWCFVALMER----LGPNF 533

  Fly   533 --DRDVDHN----LSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMW 591
              |::..|.    ||.|.||:...|.:::|    .||.:...||.||:|:.|||||.....:::|
plant   534 NRDQNGMHTQLFALSKLVELLDSPLHNYFK----ENDCLNYFFCFRWILIQFKREFEYEKTMQLW 594

  Fly   592 EACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAMYMDGQLILRKARGL 652
            |..|::||:::|||::|:|::......::.:.:..|.:|...:.|:.::|....:|.|..|
plant   595 EVMWTHYLSEHFHLYVCVAVLKRCRSKIMGEQMDFDTLLKFINELSGHIDLDSTVRDAEAL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 96/239 (40%)
AT5G52580NP_001190524.1 DUF3548 47..183 CDD:192931 36/179 (20%)
TBC 388..623 CDD:214540 97/243 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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