DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and AT5G41940

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_199009.2 Gene:AT5G41940 / 834199 AraportID:AT5G41940 Length:549 Species:Arabidopsis thaliana


Alignment Length:450 Identity:89/450 - (19%)
Similarity:158/450 - (35%) Gaps:161/450 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 YGTLLNEKGQIED-DLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEE 427
            :.....|:|::.| .:...|.|..||:..|:|..||||||..|...|..|:|..:..:|..|||.
plant    94 WNAFFTEEGRLSDGGVKFLKKVRSGGVHPSIRPEVWPFLLGVYDLKSNKEERDSIRQLKLTEYEN 158

  Fly   428 ITRK-----RLY------------SMSPEQQI---HFWKTVQ-----IVVEK------------- 454
            :.|:     ..|            |.:.:.|:   |..:.|:     |.|::             
plant   159 LRRQCREIHERYENVCDSKETAQSSNTEDSQVLESHDIEEVESSTRTITVDESEKLNSESIMQDE 223

  Fly   455 -----DVVRTD--------------RTNPFFCGDD-------NPNTEV----------------- 476
                 ||...|              .|:||...::       |...|:                 
plant   224 NCEKSDVTTEDAAGNDSDSTNPEETETSPFLANEEVESHNTVNQEKEISSPSSKPKSQAADEDFM 288

  Fly   477 ----------------------------------------------------------MKNILLN 483
                                                                      :..||..
plant   289 STWQRIIRLDAVRANDEWVPYSPTQAAVSETKARGIAIQVGLNDYDHLEPCRIFHAARLVGILEA 353

  Fly   484 FAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQRAFFVCTPTDRDVDHNLSYLRELIR 548
            :|||:..:.|.|||||||:|::..::::...||||||.|.:|.......:..:...||.:.::|:
plant   354 YAVYDPEIGYCQGMSDLLSPLIAVMEDDVLAFWCFVGFMSKARHNFRLDEVGIRRQLSMVSKIIK 418

  Fly   549 IMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYL-------------- 599
            ....|.|:||| :.::.:..|.:|.:::.|:||.|....:.:||..|::..              
plant   419 FKDIHLYRHLE-NLEAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRTGIAKATWGRI 482

  Fly   600 ------TDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAMYMDGQLILRKARGLL 653
                  |:...|:...|.:......::.:....||::...:|:|.::|...:|..|..|:
plant   483 RLRAPPTEDLLLYAIAASVLQRRKTIIEKYSGMDEIMKECNSMAGHLDVWKLLDDAHDLV 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 76/389 (20%)
AT5G41940NP_199009.2 MDN1 <137..261 CDD:227596 21/123 (17%)
TBC <325..466 CDD:214540 39/141 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22957
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2505
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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