DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and AT4G28550

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_194584.3 Gene:AT4G28550 / 828973 AraportID:AT4G28550 Length:424 Species:Arabidopsis thaliana


Alignment Length:410 Identity:100/410 - (24%)
Similarity:169/410 - (41%) Gaps:103/410 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 CRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLK 403
            |..:|.::......|  |.::...::.....: |.::.:.:||: :..||:..|::..||.|||.
plant    25 CVADVPRTRFKSRAG--KTLSARKWHAAFTGD-GHLDMERVLRR-IQRGGIHPSIKGEVWEFLLG 85

  Fly   404 CYSFSSTFEDRAVLMDIKRQEY--------------------------------EE--------- 427
            .|...||||:|..|.:.:|::|                                ||         
plant    86 AYDPDSTFEERNKLRNHRREQYYAWKEECKNMVPLVGSGKFVTMAVVAEDGQPLEESSVDNQEWV 150

  Fly   428 ----ITRKRLYSMSPEQQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYN 488
                ||.||:..         |..|...:..|||||||...|:  :...|...:.:||..:...|
plant   151 VKTAITDKRVLQ---------WMLVLSQIGLDVVRTDRYLCFY--ESESNQARLWDILSIYTWLN 204

  Fly   489 TGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQ--RAFFVCTPTDRDVDHNLSYLRELIRIML 551
            ..:.|.|||:|:.:|::..:::|::.||||...|:  |..|..|.|...|...|..|.::|:.:.
plant   205 PDIGYVQGMNDICSPMIILLEDEADAFWCFERAMRRLRENFRTTATSMGVQTQLGMLSQVIKTVD 269

  Fly   552 PHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWS-NYLTDYFHLFLCLAIIAVY 615
            |..::|||. .|..|.||..|.|::.|:|||:....:.:||..|: .|..:.|         |.|
plant   270 PRLHQHLED-LDGGEYLFAIRMLMVLFRREFSFLDALYLWELMWAMEYNPNKF---------ASY 324

  Fly   616 ADDVVAQNLR----PDEMLL-----------------HFSSLAMYMDGQLILRKARGLLHQYRQL 659
            .:   .||:.    .|..||                 ..::||:::...::..|.:.||.:.:.|
plant   325 EE---PQNMNNSSGQDPRLLKQYGKFERKYIKSGQNEQHNTLAVFVVASVLETKNKRLLKEAKGL 386

  Fly   660 PKIPCTLSGLC------KRC 673
            ..:...|.|:.      |.|
plant   387 DDVVQILGGIAGNLDARKAC 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 78/278 (28%)
AT4G28550NP_194584.3 RabGAP-TBC 163..313 CDD:366170 50/152 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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