DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and AT4G27100

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_194440.2 Gene:AT4G27100 / 828818 AraportID:AT4G27100 Length:436 Species:Arabidopsis thaliana


Alignment Length:321 Identity:86/321 - (26%)
Similarity:143/321 - (44%) Gaps:65/321 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 EMHPDEGDVKKITTNFFYGTLLN---------EKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLL 402
            ::.|:..||.|.......|..|:         ::|.:.....||: :..||:..|:|..||.|||
plant    14 QVRPECTDVPKTRFKIKPGKTLSVRKWQAVFVQEGSLHIGKTLRR-IRRGGIHPSIRGEVWEFLL 77

  Fly   403 KCYSFSSTFEDRAVLMDIKRQEY----EE------------------ITR--------------- 430
            .||...||||:|..:...:|.:|    ||                  ||.               
plant    78 GCYDPMSTFEEREQIRQRRRLQYASWKEECKQMFPVIGSGRFTTAPVITENGQPNYDPLVLQEIN 142

  Fly   431 -----------KRLYSMSP-EQQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLN 483
                       |.|.|..| :::|..|......:..||.||||...|:  :...|...:.:||..
plant   143 LGTNSNGSVFFKELTSRGPLDKKIIQWLLTLHQIGLDVNRTDRALVFY--EKKENLSKLWDILSV 205

  Fly   484 FAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQ--RAFFVCTPTDRDVDHNLSYLREL 546
            :|..:..:.|.||||||.:|::..:::|::.||||..||:  |..|..|.....|:..|::|..:
plant   206 YAWIDNDVGYCQGMSDLCSPMIILLEDEADAFWCFERLMRRLRGNFRSTGRSVGVEAQLTHLSSI 270

  Fly   547 IRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWS-NYLTDYFHLF 606
            .:::.|..::||::.... :.||..|.|::.|:|||:....:.:||..|: .|..|.|:::
plant   271 TQVVDPKLHQHLDKLGGG-DYLFAIRMLMVQFRREFSFCDSLYLWEMMWALEYDPDLFYVY 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 77/272 (28%)
AT4G27100NP_194440.2 RabGAP-TBC 174..330 CDD:278964 49/158 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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