DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and sgsm2

DIOPT Version :10

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_068069810.1 Gene:sgsm2 / 799094 ZFINID:ZDB-GENE-131119-52 Length:1057 Species:Danio rerio


Alignment Length:932 Identity:180/932 - (19%)
Similarity:297/932 - (31%) Gaps:378/932 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PIGSIIKKASSFILGDERLDRK----IDIAYEDNEI--LFCKNNVCIHPPTIARDESDILHNPGY 60
            |...|.|:.||..:.:::....    ::..::::.:  |:.||||.:.|    :.:.::|.  ||
Zfish   226 PALGIRKRQSSGSMSEDKFAASAREYVESLHQNSRVHLLYGKNNVLVQP----KKDMEVLR--GY 284

  Fly    61 LTCTTKTFVDQYNSAKRPTLLLTWIPNSSLCKYTNLNADDC------------------------ 101
            |:.        :.:|:  ||.|.|.||..:    |....||                        
Zfish   285 LSL--------HQTAE--TLTLKWTPNQLI----NGTLGDCDLEKSIYWDYALTVPLRQIVCIHC 335

  Fly   102 --------------------------------------------RGQCNP-----RSKSP----- 112
                                                        |||..|     |.|..     
Zfish   336 HQRPDCGGTLVLVSQDGIQRPPLHFPPGGHLLAFLSCLETGLLPRGQLEPPLWSQRGKGKVFPKL 400

  Fly   113 DSRNGYCHVTIPQTIQERDIREEDENAADM------------QELKNELQPLLGGQAASIDD--- 162
            ..||....:.      ::|...||:.|||.            ..:........|.:|.|:||   
Zfish   401 RKRNSTARLV------DQDGDGEDQIAADYVFRIVYPGHRHDSTVTINYHHSTGSRAPSLDDDEE 459

  Fly   163 ----LTALLKNNPITSVNITISNPQIENSNISQSFNCITIRPDSNNCSDCTNGSGVGDGPATDNP 223
                |.|::  :.|.|.|:|..|...::.::.:.                   .|.|..|.:   
Zfish   460 EEDRLHAMI--SMICSRNLTDPNVMKDHGDLMEM-------------------QGFGGSPLS--- 500

  Fly   224 KWTTPELLAFKHNLEFPDSGNSTPADRQKSAMKCRHFSVDLSQMRSLRLFFNDDNCTSGQLVIAS 288
             |...|..:...:.....:|.|..:....::..|.|..:.|..:           |.:.:..|.|
Zfish   501 -WQQGECTSHMSSCLSCSTGGSNASVELPASCTCMHDRIPLKML-----------CQNMKRQIVS 553

  Fly   289 RESQYKILHFHYGGL---DHLAQV-LHQWHCFLHNITSETGQDKFDLPYRHFMVCRPEVKKSEMH 349
            |.        .||.|   .||:.| .|......|||.                   |..|..|. 
Zfish   554 RA--------FYGWLAYCRHLSTVRTHLSALVNHNIV-------------------PPDKPCEA- 590

  Fly   350 PDEGDVKKITTNFFYGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDR 414
              .|.:.|...:.:.....|.|     :|.|.:.|::||:|..:||.||||||..|.|....::.
Zfish   591 --SGGLSKDVWSKYQKDCKNYK-----ELELLRLVYYGGVEHEIRKEVWPFLLGHYKFGMDKKNM 648

  Fly   415 AVLMDIKRQEYEEITRK------------------------------------------------ 431
            |.:.:.....|:::.|:                                                
Zfish   649 AQIDEKITARYQQVMREWKACEVIVKQREKEMQSAIFAKLSSGSSIDSHVLRLIHRDSTISNEVF 713

  Fly   432 ---------------------------------------------------RLYSMSP------- 438
                                                               |.||::.       
Zfish   714 MSVDEPDAGGQDTSCEDSTPTLTTVVTPAMLAPDERPLVEFDSPDSGLPSSRNYSVASGHSQIMS 778

  Fly   439 ------------------EQQ-----------------------------------IHFWKTVQI 450
                              |:|                                   |....||.:
Zfish   779 SIDDGQSMEEDTTPTGGLEEQGGRGSLSEDKLCSQLDKLTTTSSSEGTAPSFSSYTIELLDTVAL 843

  Fly   451 ---VVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNES 512
               .::|||.|.||...:|   .:.|.|.::||:.::...:..:.|.|||.|||||::..:.:|.
Zfish   844 NLHRIDKDVQRCDRNYYYF---TSSNLEKLRNIMCSYVWEHLEIGYVQGMCDLLAPLMVILDDEC 905

  Fly   513 ETFWCFVGLMQRA---FFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWL 574
            ..:.||..||:|.   |    ||...:|.:.:.:|.||:|:....::.:.|:.|.....||:||.
Zfish   906 LAYSCFTQLMRRMSQNF----PTGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWF 966

  Fly   575 LLCFKREFTEAVVIRMWEACW--SNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLA 637
            ||.||||.....|..:||..|  ....:.:|.||:.||::.||.|.::..|:...:::..|:.:|
Zfish   967 LLDFKRELLYEDVFAVWEVIWVAPRISSKHFVLFIALALVEVYRDIILDNNMDFTDIIKFFNEMA 1031

  Fly   638 MYMDGQLILRKARGLLHQYRQL 659
            ...|.|.|||.||.|:|:.:.|
Zfish  1032 ERHDVQHILRMARELVHKVQTL 1053

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 81/397 (20%)
sgsm2XP_068069810.1 RUN 19..201 CDD:459241
PH_RUTBC 262..432 CDD:275431 34/195 (17%)
TBC <845..1014 CDD:214540 58/175 (33%)
Blue background indicates that the domain is not in the aligned region.

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