DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and tbc1d9

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_692034.2 Gene:tbc1d9 / 563578 ZFINID:ZDB-GENE-060810-33 Length:1248 Species:Danio rerio


Alignment Length:402 Identity:80/402 - (19%)
Similarity:138/402 - (34%) Gaps:113/402 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 LEFPDSGNSTPADRQKSA----------MKCRHFSV----DLSQMRSLRLFF----------NDD 277
            :|..||.|..|:....|.          :|.|.|.|    |..|..:.:::|          :||
Zfish   354 VEKADSSNVLPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQQTTSKIYFEREITGSLSSSDD 418

  Fly   278 NCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHNITSETGQDKFDL-------PYRH 335
            ...|.|..:.|...|...|                       ::....:.:|:|       ..:.
Zfish   419 EVYSQQGSVLSCSPQRSAL-----------------------VSEGESERQFNLNDNRVPTATQA 460

  Fly   336 FMVCRPEVKKSEMHP-------DEGDVKKITTNFFYGTLLNEKGQIEDDLLLRKCVFFGGLEKSL 393
            .|.........|.:|       .|...|...|.:..|..:....:.: ||:|:      |:.:::
Zfish   461 LMTMYRRRSPEEFNPKLAKEFLKEQAWKNHFTEYGQGVCMYRTDKTK-DLVLQ------GIPENM 518

  Fly   394 RKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRL--YSMSPEQQIHFWKTVQIVVEKDV 456
            |..:|  ||    ||....:.|.    ....||::..|.:  |:::.|:           :|:|:
Zfish   519 RGELW--LL----FSGAINEMAT----HPGYYEDLVEKSMGKYNLATEE-----------IERDL 562

  Fly   457 VRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGL 521
            .|:...:|.|  .:......::.:|..:|..|..:.|.|.| :::..||.....|.|.||..|.:
Zfish   563 HRSLPEHPAF--QNEMGIAALRRVLTAYAFRNPNIGYCQAM-NIVTSVLLLYAKEEEAFWLLVAM 624

  Fly   522 MQRA---FFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMELL-----FCHRWLLLCF 578
            .:|.   ::........||..:  ..||..:.:|..|       |.|:.|     ....|.|..|
Zfish   625 CERMLPDYYNTRVVGALVDQGV--FEELAHVHVPQLY-------DCMQALGVISTISLSWFLTLF 680

  Fly   579 --KREFTEAVVI 588
              ...|..|||:
Zfish   681 LSVMPFESAVVV 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 48/214 (22%)
tbc1d9XP_692034.2 PH-GRAM1_TCB1D9_TCB1D9B 154..252 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 301..396 CDD:270161 11/41 (27%)
TBC 510..720 CDD:214540 49/222 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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