DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and tbc1d17

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_005164004.1 Gene:tbc1d17 / 554092 ZFINID:ZDB-GENE-050522-79 Length:639 Species:Danio rerio


Alignment Length:472 Identity:144/472 - (30%)
Similarity:223/472 - (47%) Gaps:76/472 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 HFSVDLSQ-MRSLRLFFNDDNCTSGQLVIASRESQY--------KILHFHYGGLDHLAQVLH--- 311
            |.|..||| ...|.||  ||  ||..||....:..|        |:.:|..|.|.:....|:   
Zfish   182 HDSGALSQSFDELHLF--DD--TSADLVSRFIQDPYATTFGGFSKVTNFFRGALRNPESPLNNRS 242

  Fly   312 -QWHCFLHNITSETGQDKFDLPYRHFMVC------RPEVKKSEMHPDEGDVKKITTNFFYGTLLN 369
             |...|.|:...|.|   |:|     :.|      |||||:.          |...|  :...|:
Zfish   243 PQDPHFPHSADEEPG---FEL-----ITCGAELGPRPEVKRG----------KPLDN--WEQFLD 287

  Fly   370 EKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLY 434
            .:|::.|...:::.||.||:...|||.||.|||..|.::||.::|..::.:|..||..: :.:..
Zfish   288 PEGRVTDPQKVKELVFRGGIVPYLRKEVWKFLLGFYPWNSTTKEREDILMVKTDEYFRM-KVQWK 351

  Fly   435 SMSPEQQIH--FWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGM 497
            |:|.||::.  .::..:.::|:||.||||.|.||.|::||...::.::|:.:.:||..:.|.|||
Zfish   352 SVSEEQEMRNSLFRGYRSLIERDVNRTDRHNSFFSGNENPGLTLLHDVLMTYCMYNFDLGYVQGM 416

  Fly   498 SDLLAPVLCEVQNESETFWCFVGLMQRAFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHN 562
            ||||:|:|...|||.|:|||..|.|.........:...:...|..|..|:|.:.|....:|:. .
Zfish   417 SDLLSPLLFVTQNEVESFWCLTGFMDLVHQNFEESQEAMKQQLLQLSLLLRALDPELCDYLDS-Q 480

  Fly   563 DSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPD 627
            ||..|.||.||||:.|||||:...::.:||..|:....:.|||.:..:|:....::::..|...:
Zfish   481 DSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRLPCENFHLLMACSILESQKEELIGSNHDFN 545

  Fly   628 EMLLHFSSLAMYMDGQLILRKARGLLHQYRQLPKIPCTLSGLCKRCGPGMWD----------SEH 682
            .:|.|.:.|.|.:|.|.:|..|..:   |.||..        ||...|.:.:          ||.
Zfish   546 SILKHINELTMKLDLQSVLCGAEAI---YLQLTH--------CKELSPKVQEVLGLRIPSGSSEQ 599

  Fly   683 RPALECVGHSDDEKCSL 699
            .|        |.|.|.:
Zfish   600 SP--------DSEACEM 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 83/232 (36%)
tbc1d17XP_005164004.1 DUF3548 5..211 CDD:192931 14/32 (44%)
TBC 303..538 CDD:214540 84/236 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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