DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBC1D16 and tbc1d17

DIOPT Version :10

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001019565.2 Gene:tbc1d17 / 554092 ZFINID:ZDB-GENE-050522-79 Length:639 Species:Danio rerio


Alignment Length:472 Identity:145/472 - (30%)
Similarity:224/472 - (47%) Gaps:76/472 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 HFSVDLSQ-MRSLRLFFNDDNCTSGQLVIASRESQY--------KILHFHYGGLDHLAQVLH--- 311
            |.|..||| ...|.||  ||  ||..||....:..|        |:.:|..|.|.:....|:   
Zfish   182 HDSGALSQSFDELHLF--DD--TSADLVSRFIQDPYATTFGGFSKVTNFFRGALRNPESPLNNRS 242

  Fly   312 -QWHCFLHNITSETGQDKFDLPYRHFMVC------RPEVKKSEMHPDEGDVKKITTNFFYGTLLN 369
             |...|.|:...|.|   |:|     :.|      |||||:.          |...|  :...|:
Zfish   243 PQDPHFPHSADEEPG---FEL-----ITCGAELGPRPEVKRG----------KPLDN--WEQFLD 287

  Fly   370 EKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLY 434
            .:|::.|...:::.||.||:..||||.||.|||..|.::||.::|..::.:|..||..: :.:..
Zfish   288 PEGRVTDPQKVKELVFRGGIVPSLRKEVWKFLLGFYPWNSTTKEREDILMVKTDEYFRM-KVQWK 351

  Fly   435 SMSPEQQIH--FWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGM 497
            |:|.||::.  .::..:.::|:||.||||.|.||.|::||...::.::|:.:.:||..:.|.|||
Zfish   352 SVSEEQEMRNSLFRGYRSLIERDVNRTDRHNSFFSGNENPGLTLLHDVLMTYCMYNFDLGYVQGM 416

  Fly   498 SDLLAPVLCEVQNESETFWCFVGLMQRAFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHN 562
            ||||:|:|...|||.|:|||..|.|.........:...:...|..|..|:|.:.|....:|:. .
Zfish   417 SDLLSPLLFVTQNEVESFWCLTGFMDLVHQNFEESQEAMKQQLLQLSLLLRALDPELCDYLDS-Q 480

  Fly   563 DSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPD 627
            ||..|.||.||||:.|||||:...::.:||..|:....:.|||.:..:|:....::::..|...:
Zfish   481 DSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRLPCENFHLLMACSILESQKEELIGSNHDFN 545

  Fly   628 EMLLHFSSLAMYMDGQLILRKARGLLHQYRQLPKIPCTLSGLCKRCGPGMWD----------SEH 682
            .:|.|.:.|.|.:|.|.:|..|..:   |.||..        ||...|.:.:          ||.
Zfish   546 SILKHINELTMKLDLQSVLCGAEAI---YLQLTH--------CKELSPKVQEVLGLRIPSGSSEQ 599

  Fly   683 RPALECVGHSDDEKCSL 699
            .|        |.|.|.:
Zfish   600 SP--------DSEACEM 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 84/232 (36%)
tbc1d17NP_001019565.2 None

Return to query results.
Submit another query.