DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBC1D16 and TBC1D2

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001254500.1 Gene:TBC1D2 / 55357 HGNCID:18026 Length:928 Species:Homo sapiens


Alignment Length:604 Identity:119/604 - (19%)
Similarity:194/604 - (32%) Gaps:211/604 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 QERD-------IREEDENAADMQELKNELQPLLGGQAASIDDLTALLKNNPITSVNITISNPQIE 185
            |||:       :||:     .:|||:..:|.|:.             ||:....|...:|     
Human   381 QERESLAHTASLREQ-----QVQELQQHVQLLMD-------------KNHAKQQVICKLS----- 422

  Fly   186 NSNISQSF----NCITIRPDSNNCSDCTNGSGVGDGPATDNPKWTTPELLAFKHNLEFPDSGN-- 244
             ..::|.|    :...:|||:.| .|..:..|..:....|...:.|.....   |.|......  
Human   423 -EKVTQDFTHPPDQSPLRPDAAN-RDFLSQQGKIEHLKDDMEAYRTQNCFL---NSEIHQVTKIW 482

  Fly   245 STPADRQKS---------AMKCRHFSVDLSQMRSLRLFFNDDNCTSGQLVIASRESQYKILHFHY 300
            ...|:::|:         |..|:..|..|:.:|.|:....|:.....:|                
Human   483 RKVAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASECSEL---------------- 531

  Fly   301 GGLDHLAQVLHQWHCFLHNITSETGQDKFDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYG 365
              |..|.|...||.      ..|...|..:|        .|..|..|                ||
Human   532 --LRQLVQEALQWE------AGEASSDSIEL--------SPISKYDE----------------YG 564

  Fly   366 TLLNEKGQIEDDLLLRKC--------------------------------------VFFGGLEKS 392
            .|.....::||..||.|.                                      :...|:.:.
Human   565 FLTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAGVPRE 629

  Fly   393 LRKTVWPFLLK----------CYSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHFWKT 447
            .|..||.:|:.          ||.                   |.::|.:.......:||     
Human   630 HRPRVWRWLVHLRVQHLHTPGCYQ-------------------ELLSRGQAREHPAARQI----- 670

  Fly   448 VQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNES 512
                 |.|:.||...|..|....:...:.::.:||.|:..|..:.|.||::.|.|..|..::.|.
Human   671 -----ELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEE 730

  Fly   513 ETFWCFVGLMQR---AFFVC-TPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRW 573
            ..|||.|.:::.   |.:.| |.|...||..:  |::|:...||....||.||:..:.|: ...|
Human   731 SAFWCLVAIVETIMPADYYCNTLTASQVDQRV--LQDLLSEKLPRLMAHLGQHHVDLSLV-TFNW 792

  Fly   574 LLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAM 638
            .|:.|.......:::|:|:|          .|:....::..||..:...|.:.            
Human   793 FLVVFADSLISNILLRVWDA----------FLYEGTKVVFRYALAIFKYNEKE------------ 835

  Fly   639 YMDGQLILRKARGL-LHQY 656
                  |||...|| ::||
Human   836 ------ILRLQNGLEIYQY 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 56/244 (23%)
TBC1D2NP_001254500.1 Interaction with CADH1 1..169
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
PH_TBC1D2A 47..147 CDD:269966
PH 47..139 CDD:278594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..275
Interaction with RAC1. /evidence=ECO:0000269|PubMed:20116244 295..433 16/75 (21%)
TBC 625..837 CDD:214540 57/271 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.