DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and grtp1b

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001017810.1 Gene:grtp1b / 550508 ZFINID:ZDB-GENE-050417-346 Length:349 Species:Danio rerio


Alignment Length:305 Identity:62/305 - (20%)
Similarity:120/305 - (39%) Gaps:68/305 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 YGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQE--YE 426
            :..||...|::|.:|.:::.| ..|:....|..:|      .:||.. :|:     ::|..  |:
Zfish    56 WSKLLQGTGKMEKNLKVKRYV-RKGIPCEHRTEIW------MAFSGA-QDQ-----LERNPGYYQ 107

  Fly   427 EITRKRLYSMSPEQQIHFWKTVQIVVEKDVVRTDRTN-PFFCGDDNPNTEVMKNILLNFAVYNTG 490
            .:.:...:....|:.||          .|:.||...| .|.....:...:.:.|:||.:..:|..
Zfish   108 ALLKTEQHDPKIEEVIH----------ADMHRTFPDNIQFRHSSQSCLQKALFNVLLAYGHHNKD 162

  Fly   491 MSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQRA---FFVCTPTDRDVDHNLSYLRELIRIMLP 552
            :.|.|||:.:...:|...::|.::||..|.|:.|.   ::..|.....||..:  |.||::..:|
Zfish   163 VGYCQGMNFIAGYLLIITKDEEKSFWLMVALIGRILPDYYTQTMLGLKVDQEV--LGELVKSKVP 225

  Fly   553 HFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYAD 617
            ..::.:.|| |.|..|...||.:..:........|:|:|:.                        
Zfish   226 AVWQTMNQH-DVMWTLVVSRWFICLYVDVLPVETVLRIWDC------------------------ 265

  Fly   618 DVVAQNLRPDEMLLHFSSLAMYMDGQLILRKARGLLHQYRQLPKI 662
                        |.:..|..::.....::|..:.|:.|.:.||:|
Zfish   266 ------------LFYEGSKILFRVALTLIRHNQNLISQAKSLPEI 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 48/236 (20%)
grtp1bNP_001017810.1 TBC 76..289 CDD:214540 52/274 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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