DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and Tbc1d13

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_575106.2 Gene:Tbc1d13 / 499768 RGDID:1591937 Length:400 Species:Rattus norvegicus


Alignment Length:434 Identity:97/434 - (22%)
Similarity:172/434 - (39%) Gaps:99/434 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 SVDLSQMRSLRLFFNDDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHNITSETG 325
            |:.|.::|.|.  |:...|..|...:.     :|||      |::|......|...|   ..:.|
  Rat    20 SIVLEKLRELS--FSGIPCEGGLRCLC-----WKIL------LNYLPLERDSWDSIL---AKQRG 68

  Fly   326 QDKFDLPYRHF---MVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQI-------EDDLLL 380
            .      |..|   |:.:|.:.|:.|.....||.      |....||.....       ::::||
  Rat    69 L------YSQFLREMIIQPGIAKANMGVSREDVT------FEDHPLNPNPDSRWNTYFKDNEVLL 121

  Fly   381 RKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHFW 445
            :       ::|.:|:     |....||.....:...|:.:..|...|..|||:...:.:.|    
  Rat   122 Q-------IDKDVRR-----LCPDISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQ---- 170

  Fly   446 KTVQIVVEKDVVRTDRTNPFFCGDDN-----------PN-----TEVMKNILLNFAVYNTGMSYS 494
                 .|.::  |:..||......:|           ||     .||::.||..:|..|.|::|.
  Rat   171 -----TVARN--RSGVTNMSSPHKNNAPSALNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYV 228

  Fly   495 QGMSDLLAPVL----------CEVQNESETFWCFVGLMQ--RAFFVCTPTDRDVDHNLSYLRELI 547
            |||::::.|:.          .:...|::||:||..||.  |..|:.:..|...  .::|..|.:
  Rat   229 QGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQC--GITYKMEKV 291

  Fly   548 RIMLP----HFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLC 608
            ...|.    ..|..|::.:...: .|..|||.|...:||....|||:|::.:::.....|.|.:|
  Rat   292 YSTLKEKDVELYLKLQEQSIKPQ-FFAFRWLTLLLSQEFLLPDVIRIWDSLFADGNRFDFLLLVC 355

  Fly   609 LAIIAVYADDVVAQNLRPDEMLLHFSSLAMYMDGQLILRKARGL 652
            .|::.:..:.::..:...:..||....::   |...||:||:.|
  Rat   356 CAMLILIREQLLKGDFTVNMRLLQDYPIS---DVCKILQKAKEL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 61/262 (23%)
Tbc1d13XP_575106.2 TBC 32..367 CDD:214540 84/386 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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