DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBC1D16 and tbc1d16

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_012814267.2 Gene:tbc1d16 / 448159 XenbaseID:XB-GENE-986691 Length:727 Species:Xenopus tropicalis


Alignment Length:746 Identity:321/746 - (43%)
Similarity:439/746 - (58%) Gaps:99/746 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPIGSIIKKASS----FIL-----GDERLDRKIDIAYEDNEILFCKNNVCIHPPTIARDESDILH 56
            |.:|.::::|||    |:.     |...:        .|.||:|.|||||:|||.:.:|...  |
 Frog     1 MSLGRLLRRASSKASDFLTLSSGGGSSSI--------LDGEIIFSKNNVCVHPPELLQDVGS--H 55

  Fly    57 NPGYLTCTTKTFVDQYNSAKRPTLLLTWIPNSSLCKYTNLNADDCRGQCNPRSKSPDSRNGYCHV 121
            :||||....:.  |::...   ||:|.|:|||.:.:...........:.:|..|:|..||.....
 Frog    56 HPGYLCVYMEK--DEFLGT---TLILAWVPNSRIQRQDEEALRYITPESSPIRKNPRKRNRQPPG 115

  Fly   122 TIPQT------IQERDI-RE------------------------EDENAADMQELKNELQPLLGG 155
            :.|.|      |.:.|: ||                        |||.:.|:...:......|..
 Frog   116 SAPTTRSKPAIISKEDVGREVNSPTERDPSYGSAEGVEEGTEQGEDERSLDLSSDEVSKDSTLDS 180

  Fly   156 QAASIDDLTALLKNNPIT-SVNITISNPQIENSNISQSFNCITIRPDSNNCSDC---TNGSGVGD 216
            .:.:......|   :||: ::..:.|:..:||.|..:|.:.::....|.|.:..   .||.||  
 Frog   181 DSDAFSSPFCL---SPISEALGESSSSVFLENENRDESNSHMSSYASSLNANSQLPEINGQGV-- 240

  Fly   217 GPATDNPKWTTPE-LLAFKHNLEFPDSGNSTPADRQKSAMKCRHFSVDLSQMRSLRLFFNDDNCT 280
             ||    ||...: |||.:..                    |..|.|||.||||||.||:|:.||
 Frog   241 -PA----KWEEQQKLLALEQT--------------------CGVFRVDLGQMRSLRFFFSDEACT 280

  Fly   281 SGQLVIASRESQYKILHFHYGGLDHLAQVLHQW-HCFLHNI-TSETGQDKFDLPYRHFMVCRPEV 343
            |||||:||||||||:.|||:|||..|::|..|| :|....: ..:..:||..|   ||.:.||.:
 Frog   281 SGQLVVASRESQYKVFHFHHGGLGKLSEVFQQWKYCRETQLKEQQVTEDKTCL---HFSIQRPNL 342

  Fly   344 KKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFS 408
            ..||.||:||..:::....:. ..|||.||:|::..|||.:||||::.|||..||||||..|.:.
 Frog   343 PSSESHPEEGMYRRLDVTSWL-EHLNEVGQVEEEYKLRKLIFFGGIDPSLRGEVWPFLLGYYPWE 406

  Fly   409 STFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPN 473
            .|.|||..|...:|:||.:|.:||: ||||..|..|||.||..|:||||||||:|.||.|:||||
 Frog   407 ITSEDREALRVHRREEYSQIQKKRV-SMSPTAQKEFWKNVQFTVDKDVVRTDRSNQFFRGEDNPN 470

  Fly   474 TEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQRAFFVCTPTDRDVDH 538
            .|.|:.||||:|||:.|:.||||||||:||:|.||.:||:||||||||||...|:.:|.|..::.
 Frog   471 VESMRRILLNYAVYSPGVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFISSPRDEYMEK 535

  Fly   539 NLSYLRELIRIMLPHFYKHL-EQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDY 602
            .|.|||||:|::.|.||:|| ....|.:::||||||:||||||||.::..:|||||||::|.|||
 Frog   536 QLLYLRELLRLVHPRFYQHLYSLGEDGLQMLFCHRWILLCFKREFPDSEALRMWEACWAHYQTDY 600

  Fly   603 FHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAMYMDGQLILRKARGLLHQYRQLPKIPCTLS 667
            ||||||:|||.:|.|||:.|.|..|:||||||:|||:|:|:|:|||||.||:|:|.||:|||:|.
 Frog   601 FHLFLCVAIIVLYGDDVIEQQLPTDQMLLHFSNLAMHMNGELVLRKARSLLYQFRLLPRIPCSLH 665

  Fly   668 GLCKRCGPGMWDSEHRPALECVG-HSDDEKC 697
            .|||.|.||||||.:.|.:||.| ||:.|.|
 Frog   666 DLCKLCSPGMWDSGYIPPVECTGHHSESESC 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 136/231 (59%)
tbc1d16XP_012814267.2 TBC 385..613 CDD:214540 135/228 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 287 1.000 Domainoid score I1567
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10380
Inparanoid 1 1.050 559 1.000 Inparanoid score I1088
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 1 1.000 - - FOG0006347
OrthoInspector 1 1.000 - - oto104279
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3820
SonicParanoid 1 1.000 - - X2505
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

Return to query results.
Submit another query.