DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and GAPsec

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster


Alignment Length:448 Identity:98/448 - (21%)
Similarity:169/448 - (37%) Gaps:138/448 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 VDLSQMRSLRLFFN--DDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHNITSET 324
            :||.|:|  :|.||  .|       |.:.|...:|:|      |.:|......|       |:..
  Fly    22 IDLKQLR--KLAFNGVPD-------VQSFRALSWKLL------LGYLGPRRSSW-------TTTL 64

  Fly   325 GQDKFDLPYRHF---MVCRPEVKKSEMHPDEGDVKKITT--------------NFFYGTLLNEKG 372
            .|.:  ..|:.|   :|..|....:....|.||..|:.:              ...:.|..|:..
  Fly    65 AQKR--ALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNE 127

  Fly   373 ---QIEDDLLLRKC---VFF---------------GGLEKSLRKTVWPFLLKCYSFSSTFEDRAV 416
               ||:.| :.|.|   .||               |...:.|.:.|.|.:|.    |:..|.:.:
  Fly   128 FLLQIDKD-VRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLS----SANVERKGL 187

  Fly   417 LMDIKRQEYEEITRKRL--YSMSPEQQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKN 479
            .|    .:...||::.:  |:...|.|...|                             ||::.
  Fly   188 GM----TKINLITKRSVENYAAMEEGQEAHW-----------------------------EVVQR 219

  Fly   480 ILLNFAVYNTGMSYSQGMSDLLAPVLCEVQN----------ESETFWCFVGLMQ--RAFFVCTPT 532
            ||..:|..|.|..|.|||::::.|:...:.:          |::.|:||..||.  |.||:.|..
  Fly   220 ILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLD 284

  Fly   533 DRD--VDHNLSYLRELIRIMLPHFYKHLEQHNDSMEL---LFCHRWLLLCFKREFTEAVVIRMWE 592
            |.:  :...::.|..:::......|:.|.    |.||   .:..|||.|...:||....|:|:|:
  Fly   285 DAEGGIKFMMARLSNMLKSKDLSIYELLR----SQELHPQYYSFRWLTLLLSQEFPLPDVLRIWD 345

  Fly   593 ACWSNYLTDYFHLFLCLAIIAV---------YADDV-VAQNLRP---DEMLLHFSSLA 637
            :.:::.....|.:.:|.::|.:         :|.:| :.||..|   :.::.|..|||
  Fly   346 SVFADEQRFDFLIKICCSMILIQREAILENDFASNVKLLQNYPPIDINVVIAHAGSLA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 56/258 (22%)
GAPsecNP_648245.2 TBC <191..373 CDD:214540 47/214 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456500
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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