DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and Tbc1d15

DIOPT Version :10

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001414160.1 Gene:Tbc1d15 / 366896 RGDID:1307920 Length:688 Species:Rattus norvegicus


Alignment Length:347 Identity:116/347 - (33%)
Similarity:182/347 - (52%) Gaps:41/347 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 RPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKC 404
            ||.|::.|....|...|.:.:.   |.|||.:.       :::.:|.|||..||||..|.|||..
  Rat   308 RPVVQRREPVSLEEWTKSLDSE---GRLLNVES-------MKQMIFRGGLSHSLRKQAWKFLLGY 362

  Fly   405 YSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHFWKTV--------------QIVVEKD 455
            :.:.||.|:|.   .:::|:.:|..|.:|.          ||:|              :.::|||
  Rat   363 FPWDSTKEERT---QLQKQKTDEYFRMKLQ----------WKSVSEAQEKRNSRLRDYRSLIEKD 414

  Fly   456 VVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVG 520
            |.||||||.|:.|.|||...::.:||:.:.:|:..:.|.|||||||:|:|..::||.:.||||..
  Rat   415 VNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFAS 479

  Fly   521 LMQRAFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEA 585
            .|.:.........:.:...|..|..|:|::...|..:||. .||..|.||.||||:.|||||:..
  Rat   480 YMDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLES-QDSGYLYFCFRWLLIRFKREFSFL 543

  Fly   586 VVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAMYMDGQLILRKAR 650
            .::|:||..|:......|||.||.||:......::.::...:|:|.|.:.|:|.:|.:.||.||.
  Rat   544 DILRLWEVMWTELPCKNFHLLLCCAILESEKQQIMEKHYGFNEILKHINELSMKIDVEDILCKAE 608

  Fly   651 GL---LHQYRQLPKIPCTLSGL 669
            .:   :.|.::||:..|.:.||
  Rat   609 AISLQMAQCKELPQAVCEILGL 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 89/244 (36%)
Tbc1d15NP_001414160.1 None

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