DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and Tbc1d10b

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001102391.1 Gene:Tbc1d10b / 365372 RGDID:1309191 Length:795 Species:Rattus norvegicus


Alignment Length:488 Identity:90/488 - (18%)
Similarity:164/488 - (33%) Gaps:151/488 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 ITIRP---DSNNCSDCTNGSGVGDGPATDNPKWTTPELLAFKHNL--------EFPDSGNSTPAD 249
            :|:.|   .:.|..|.  ||....||....|:...|:.|::..::        ...|..:|..:|
  Rat   214 VTVTPAPETTENFQDL--GSTSSLGPGISGPRGQAPDTLSYLDSVSLMSGTLESLTDDVSSVGSD 276

  Fly   250 RQKSAMKCRHFSVDLSQMRSLRLFFNDDNCTSGQL-----VIASRESQYKILHFHYGGLDHLAQV 309
            .:.:.:..|         ::.:..|...:..||.|     |..:|:.:.|.|           ::
  Rat   277 SEINGLALR---------KTDKYGFLGGSQYSGSLESSIPVDVARQRELKWL-----------EM 321

  Fly   310 LHQWHCFLHNITSETGQDKFDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQI 374
            ...|..:|.               |.|.    :||                              
  Rat   322 FSNWDKWLS---------------RRFQ----KVK------------------------------ 337

  Fly   375 EDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPE 439
               |..||     |:..|||...|.:|      |::.|    |::....::||:.|.   ...|:
  Rat   338 ---LRCRK-----GIPSSLRAKAWQYL------SNSKE----LLEQNPGKFEELERA---PGDPK 381

  Fly   440 QQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPV 504
                 |..   |:|||:.|....:..|........:.:..||..:.:|.....|.|..:.:.|.:
  Rat   382 -----WLD---VIEKDLHRQFPFHEMFAARGGHGQQDLYRILKAYTIYRPDEGYCQAQAPVAAVL 438

  Fly   505 LCEVQNESETFWCFVGLMQR---AFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSME 566
            |..:..| :.|||.|.:..:   .::........:|..:.:  .|:|...|..::||.:.... .
  Rat   439 LMHMPAE-QAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFF--ALLRRASPLAHRHLRRQRID-P 499

  Fly   567 LLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLL 631
            :|:...|.:..|.|....|.|:|:|:            :|.|..:..::...:|        :|.
  Rat   500 VLYMTEWFMCIFARTLPWASVLRVWD------------MFFCEGVKIIFRVALV--------LLR 544

  Fly   632 H-FSSLAMYMDGQLILRKARGLLHQYRQLPKIP 663
            | ..|:..       ||..:|:.....||..:|
  Rat   545 HTLGSVEK-------LRSCQGMYETMEQLRNLP 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 48/233 (21%)
Tbc1d10bNP_001102391.1 TBC 340..545 CDD:214540 52/254 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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