DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and Tbc1d21

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001014232.1 Gene:Tbc1d21 / 363072 RGDID:1310243 Length:336 Species:Rattus norvegicus


Alignment Length:312 Identity:71/312 - (22%)
Similarity:136/312 - (43%) Gaps:49/312 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 PEVKKSEMHPDEGDVKKITTNFF--YGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLK 403
            |.:.|:|.           .:||  .|.|...:..|..::|.|      ||...:|...|.||..
  Rat    25 PPIDKAEW-----------DSFFDENGHLAKSRDFICVNILER------GLHPLVRADAWKFLTG 72

  Fly   404 CYSFSSTFEDRAVLMDIKRQEYEEITR---------KRLYSMSPEQQIHFWKTVQIVVEKDV--- 456
            .||:.|:.::|.::...:|:.|..:.:         :.|:....|.:.:....:|.:.:||.   
  Rat    73 YYSWQSSRDERLMVDSNRRRNYNSLCQMYEKIQPLLENLHGNFTETRNNIVYDIQKLYDKDPLGN 137

  Fly   457 VRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGL 521
            |..|:            .::.|.:||:: |.||...|.:|..:::......|:::.||||.|...
  Rat   138 VLVDK------------KKLEKTLLLSY-VCNTKAEYQRGFHEMVMLFQLMVEHDHETFWLFQFF 189

  Fly   522 MQRAFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLE-QHNDSMELLFCHRWLLLCFKREFTE- 584
            :|:....|. .:..|..||..|..||.::.|.|..||: :.:.:::.||  .|..|||:|.|.. 
  Rat   190 LQKTEHSCV-INIGVGKNLDMLNNLITLLDPQFADHLKGKGSGAVQSLF--PWFCLCFQRAFKSF 251

  Fly   585 AVVIRMWEACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSL 636
            ..|.|:||...:......|.:.:..:::.:..:..:.:::..|.:|:..:.|
  Rat   252 DDVWRLWEVLLTGKPCRNFQVLVAYSMLQMVREQALLESMSGDAILMACNKL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 58/244 (24%)
Tbc1d21NP_001014232.1 RabGAP-TBC 62..287 CDD:295329 56/240 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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