DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and Tbc1d14

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001106836.1 Gene:Tbc1d14 / 360956 RGDID:1309993 Length:714 Species:Rattus norvegicus


Alignment Length:614 Identity:126/614 - (20%)
Similarity:212/614 - (34%) Gaps:164/614 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 CNP------------RSKSPDSRNGYCHVTIPQTIQERDIREEDENAADMQELKNELQPLLGGQA 157
            |.|            |..|...|.||..|.:.....:...|.:|.:...:..|..||...|  ..
  Rat   131 CTPSAPTGSEREQAVRKSSTFPRTGYDSVKLYSPTSKALSRSDDVSVCSVSSLGTELSTTL--SV 193

  Fly   158 ASIDDLTALLKNNPITSVNITISN---PQIENSNISQSFNCITIRPDSN-NCSDCTNGSGVGDGP 218
            ::.|.|..::.:|  :|..:|:.|   ||..:..:|      :|:..|: :..||...:..|...
  Rat   194 SNEDILDLMVTSN--SSAIVTLENDDDPQFTDVTLS------SIKETSDLHQQDCVAETEEGRKL 250

  Fly   219 ATDNP--KWTTPELLAFKHNLEFPDSGNSTPADRQKSAMKCRHFSVDLSQMRSLRLFFN------ 275
            ....|  .:.|..|||.|.|...         |||:          ||    ..:||..      
  Rat   251 RLLQPFSHFFTRNLLARKQNARL---------DRQR----------DL----GWKLFGKVPLRET 292

  Fly   276 ------------DDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHNITSETGQDK 328
                        :|.........:.:::..|.|.|.  .|...|.:|......|....:|..| |
  Rat   293 AQKDSKKTQKEYEDKAGRPSRPPSPKQNVRKNLDFE--PLSTTALILEDRPANLPAKPAEEAQ-K 354

  Fly   329 FDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDL----------LLRK- 382
            ....|...:|   :.||.|:...:...|:          |.|:.::|:.:          :|.. 
  Rat   355 HRQQYEEMVV---QAKKRELKEAQRRKKQ----------LEERCKVEESIGNAVLTWNNEILPNW 406

  Fly   383 ----C------VFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMS 437
                |      :::.|:..|:|..||...:. ...:.|.|    |.||.....:|    |..|:|
  Rat   407 ETMWCSKKVRDLWWQGIPPSVRGKVWSLAIG-NELNITHE----LFDICLARAKE----RWRSLS 462

  Fly   438 P-----EQQIHFWKTVQIVVEKDVVRTD--RTNPFFC--GDDNPNTEVMKNILLNFAVYNTGMSY 493
            .     |.:...:.........::::.|  ||.|..|  ....|..:::.:||..:..|...:.|
  Rat   463 TGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGY 527

  Fly   494 SQGMSDLLAPVLCEVQNESETFWCFVGLM----QRAFFVCTPTDRDVDHNL-----SYLRELIRI 549
            .|||| .:|.||....:.::.|..|..|:    |.|||       .|||.|     :........
  Rat   528 VQGMS-FIAAVLILNLDTADAFIAFSNLLNKPCQMAFF-------RVDHGLMLTYFAAFEVFFEE 584

  Fly   550 MLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEA-C-----------------WS 596
            .||..:.|.:::|.:.: ::...|:...:.:.....:..|:|:. |                 :.
  Rat   585 NLPKLFAHFKKNNLTAD-IYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFE 648

  Fly   597 NYLT--DYFH--LFLCLAIIAVYADDVVA 621
            :.||  |:.|  .||......:.||||.|
  Rat   649 DILTRMDFIHSAQFLTRLPEDLPADDVFA 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 58/270 (21%)
Tbc1d14NP_001106836.1 DUF4207 147..384 CDD:290615 57/285 (20%)
TBC 419..651 CDD:214540 51/249 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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