DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and tbc-18

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_509421.2 Gene:tbc-18 / 181091 WormBaseID:WBGene00018281 Length:826 Species:Caenorhabditis elegans


Alignment Length:328 Identity:70/328 - (21%)
Similarity:130/328 - (39%) Gaps:76/328 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 HLAQVL-HQWH-----CFLHNITSETGQDKFDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFF 363
            ||::.| :..|     .:|.::..|.   |.|:.:.|  :..||:|...                
 Worm    98 HLSEPLENSTHKLKLISYLQDVHKEV---KDDVLWSH--ILGPELKTDR---------------- 141

  Fly   364 YGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEI 428
            :..||.|                ||:..|:|..:||.|...               .|:|:..:.
 Worm   142 FEELLKE----------------GGIPHSMRPFLWPRLSGA---------------TKKQKDAKY 175

  Fly   429 TRKRLYSMSPEQQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSY 493
            |.:.:.....:.:    .::.:.:|:|::||...|..|...::...|.::.||...|.....:.|
 Worm   176 TYESVLQQCAQDK----PSIGVQIERDLLRTLPNNICFWKKNSEGIEALRRILKCVAFIYPDLGY 236

  Fly   494 SQGMSDLLAPVL--CEVQNESETFWCFVGLMQRA----FFVCTPTDRDVDHNLSYLRELIRIMLP 552
            .|||..::|.:|  |   :|..|||....|::..    |:..|......|..:|  |.|::..:|
 Worm   237 CQGMGVIVATLLLYC---SEETTFWMMTALIEDILPPNFYTQTLLGLQADERVS--RHLMKCHVP 296

  Fly   553 HFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYFHLFLCLAIIAVYAD 617
            ...|.||.:...:.||.. .|||..|...|...|::|:|:..:.:...:.|.:.  ::|:.:...
 Worm   297 DLNKALEDYEVEVSLLTV-SWLLTLFGSVFRTRVMLRVWDFIFYSGGVNIFRVI--ISILKMKEQ 358

  Fly   618 DVV 620
            ::|
 Worm   359 EIV 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 54/236 (23%)
tbc-18NP_509421.2 TBC 148..361 CDD:214540 55/255 (22%)
SH3_SGSM3 528..580 CDD:212747
RUN 607..765 CDD:280855
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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