DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and tbc-9

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_502598.2 Gene:tbc-9 / 178316 WormBaseID:WBGene00012868 Length:1247 Species:Caenorhabditis elegans


Alignment Length:360 Identity:78/360 - (21%)
Similarity:132/360 - (36%) Gaps:78/360 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 PEVKKSEMHPDEGDVKKITTNFF---YGTLLNEKGQIEDDLLLRKCVFFGGLEKSLRKTVWPFLL 402
            |.::|.....|..|..:...|.:   |||.:.....:|...||.:     |:...||..:|   :
 Worm   444 PLIEKYPFGADASDKCREKWNKYLQEYGTGVCMYRTVELHRLLLE-----GVPLQLRGQIW---M 500

  Fly   403 KCYSFSSTFEDRAVLMDIKRQEYEEITRKR--LYSMSPEQQIHFWKTVQIVVEKDVVRTDRTNPF 465
            .|       ...|..|.:....|.|:..|.  :||::.|:           :|:|:.|:...:|.
 Worm   501 VC-------SGAAAEMALNPGYYRELLHKNQGVYSVALEE-----------IERDLHRSLPEHPA 547

  Fly   466 FCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLMQRA---FF 527
            |  ...|..:.::.||..:|..|..:.|.|.| :::..||.....|.|.||..|.:.:|.   ::
 Worm   548 F--QQGPGIDALRRILTAYAFRNPNIGYCQAM-NIVGSVLLLFTKEEEAFWLLVAVCERLLPDYY 609

  Fly   528 VCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHN-DSMELLFCHRWLLLCFKREFTEAVVIRMW 591
            ........||..:  ..||:..:||.....|.:.. |.|..|   .|.|..|.........:|:.
 Worm   610 NTKVVGALVDQGV--FSELVERLLPTVGAQLTRLGLDDMVAL---SWFLTVFLSAIKFDAAVRIL 669

  Fly   592 EACWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPD-EMLLHFSSLAMYMD-------------- 641
            :.    :..:...|...:|:..:..::.:....|.| |:|:   |||.|.:              
 Worm   670 DL----FFFEGARLMFQVALEMLKENEKLICESRDDGEILM---SLAKYTESIYEGDTVVERKPS 727

  Fly   642 ----GQLI---LRKARGLLHQY------RQLPKIP 663
                |..|   |.:|...:..:      |..||||
 Worm   728 TVQLGTTILSDLEEAASTMINFMGTDITRTFPKIP 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 50/236 (21%)
tbc-9NP_502598.2 PH-GRAM1_TCB1D9_TCB1D9B 154..253 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 309..406 CDD:270161
TBC 489..695 CDD:214540 50/238 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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