DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and tbc-2

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_495156.1 Gene:tbc-2 / 173986 WormBaseID:WBGene00022880 Length:908 Species:Caenorhabditis elegans


Alignment Length:605 Identity:124/605 - (20%)
Similarity:208/605 - (34%) Gaps:177/605 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NADDCRGQCNPRSKS-PDSRNG-YCHVTIPQ----TIQERDIRE------EDENAADMQELKNEL 149
            |.:|..|..:.||.: |...|| ...|.:|:    .:...|..|      ::||..|:    .||
 Worm   398 NREDLLGSISERSSNIPADANGLVSDVEVPEGILVDVSSVDCEEATRKVLDEENVRDI----GEL 458

  Fly   150 QPLLGGQAASIDDLTALLKNNPITSVN-ITISNPQIENSNISQSFNCITIRPDSNNC-------- 205
            |.|:.|.......|     |..|..:: ||.|....|...|.|:|       |...|        
 Worm   459 QDLVEGYRTQNQFL-----NAEIVQLHAITQSLEDREKKLIRQNF-------DLEACYYQLKSRY 511

  Fly   206 --------SDCTNGSGVGDGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADRQKSAMKCRHF-- 260
                    |....|            |...|.:|.     |..:....||.:.|::......|  
 Worm   512 LMVLNHFKSPTKPG------------KIMEPGVLK-----ELLEESARTPRESQQNLTDQLGFYK 559

  Fly   261 SVDLSQMRSLRLFFNDDNCT-----SGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHN- 319
            ..|.|:...|.     |..|     :|.:|.|::..|          .:...:.|..|..||.| 
 Worm   560 KDDFSESDDLL-----DTATFYMKKAGDVVEATKLEQ----------SEEYMKWLQSWDAFLVNN 609

  Fly   320 -ITSETGQDKFDLPYRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLLLRKC 383
             ::.:|.           ::..|::|                     ||:..             
 Worm   610 TVSRQTA-----------IMSSPDLK---------------------TLIRT------------- 629

  Fly   384 VFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMDIKRQEYEEITRKRLYSMSPEQQIHFWKTV 448
                |:..:.|..||..::     :...:|:..  ::....|:.:.||    ...::|...:...
 Worm   630 ----GVPPAYRGRVWKIIV-----THWVKDKQA--ELGNGYYQSMLRK----AGTKKQDGSYDAA 679

  Fly   449 QIVVEKDVVRTDRTNPFFCGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESE 513
            ...::.|:.||..||..|...|:.|.|.::|:|..|..:|:.:.|.||::.|.|..|..: :|.:
 Worm   680 IKQIDLDLARTLPTNKLFDEPDSANIEKLRNVLYAFRYHNSHVGYCQGLNRLAAIALLNL-DEQD 743

  Fly   514 TFW----CFVGLMQRAFFVCTPTDRDVDHNLSYLRELIRIMLPHFYKHLEQHNDSMEL---LFCH 571
            :||    |...|....::..:......|..:  ||:|:...||....||.    ::|:   ||..
 Worm   744 SFWFLVACVEHLQPEGYYTSSLIGAVADQKV--LRDLVAEKLPKLAAHLR----ALEVDLSLFAL 802

  Fly   572 RWLLLCFKREFTEAVVIRMWEACW--SNYLTDYF----------HLFLCLAIIAVYADDVVAQNL 624
            .|.|.||......::.:.:::|..  .|.:...|          |:..|..|..|:.....||  
 Worm   803 SWFLTCFVDVLPHSIYLTIFDAFLYEGNKVLFRFALALFKICEPHVLQCKTIGTVHQCLSKAQ-- 865

  Fly   625 RPDEMLLHFSSLAMYMDGQL 644
               |.::.|.|||.....:|
 Worm   866 ---EHIIDFKSLAQVAFNEL 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 55/249 (22%)
tbc-2NP_495156.1 PH_TBC1D2A 20..119 CDD:269966
PH 20..111 CDD:278594
ATG16 235..400 CDD:285778 1/1 (100%)
DUF1664 <289..368 CDD:285172
TBC 627..849 CDD:214540 52/256 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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