DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D16 and tbc1d12b

DIOPT Version :9

Sequence 1:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_005169505.1 Gene:tbc1d12b / 100332088 ZFINID:ZDB-GENE-121214-108 Length:771 Species:Danio rerio


Alignment Length:662 Identity:124/662 - (18%)
Similarity:214/662 - (32%) Gaps:217/662 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NADDCRG----QCNP------RSKSPD----SRNGYCHVTIPQT----IQERDIREEDENAA--- 140
            :.|.|.|    :||.      .|.||.    |...:...|...|    :...|..:|||..:   
Zfish   184 STDHCLGLQSSECNEGKLHRRSSTSPSPLKHSLRTFSSSTFLNTDSASLSPNDDDDEDETFSTSD 248

  Fly   141 ---DMQ----ELKNELQPLLGGQAASIDDLTALLKNNPITSVNITISNPQIENSNISQSFNCITI 198
               |::    .||:.....:..:.::.|::..:|.   :.:|::|:..   ....||..|:....
Zfish   249 RPDDLRFMDVSLKSRNTYEISRRQSAPDNIPGVLS---VAAVDLTLGQ---RKQGISDIFSRSLF 307

  Fly   199 RPDSNNCSDCTNGSGVGDGPATDNP-----------------KWTTPELLAFKHNLEFPDSGNST 246
            ................|..|..::|                 ..:||.||:         ||.  
Zfish   308 TRKQREAQSAPGWKLFGKVPLRESPPKDSKTIQQESNPGNLTSVSTPNLLS---------SGE-- 361

  Fly   247 PADRQKSAMKCRHFSVDLSQMRSLRLFFNDDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLH 311
                                       :....|.|||......:|:.|.|.|.  .|...|.:|.
Zfish   362 ---------------------------YEAKVCKSGQSPSLPAQSRRKNLEFE--PLSTTALILE 397

  Fly   312 QWHCFLHNITSETGQDKFDLPYRH-----FMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEK 371
            .....|...:.|..|       ||     .||.  |.||.|:...:...|::...|      .::
Zfish   398 DRPANLPAKSEEEAQ-------RHRQEYDEMVA--EAKKRELKEAQKKKKQMKERF------KQE 447

  Fly   372 GQIEDDLLL---------------RKC--VFFGGLEKSLRKTVWPFLLKCYSFSSTFEDRAVLMD 419
            ..|.:.:::               |:.  :::.||..::|..||..              ||..:
Zfish   448 ESIANAMVVWNTEILPNWESMRGTRRVRDLWWQGLPPNVRGKVWSL--------------AVGNE 498

  Fly   420 IKRQEYEEITRKRLYSMSPEQQIHFWKTVQIV---VEKDVVRTD-------------RTNP--FF 466
            :      .|| ..||.:...:....||:.:..   :|.||...|             ||.|  |.
Zfish   499 L------NIT-SDLYEIFLSRAKERWKSFRETGSEIESDVDSADRESSLDLIKLDISRTFPSLFI 556

  Fly   467 CGDDNPNTEVMKNILLNFAVYNTGMSYSQGMSDLLAPVLCEVQNESETFWCFVGLM----QRAFF 527
            .....|..:::.::|..:..|...:.|.||||.:.|.::..:: |::.|..|..|:    |.|||
Zfish   557 FQKGGPYHDLLHSVLGAYTCYRPDVGYVQGMSFIAAVLILNLE-EADAFIAFANLLNKPCQMAFF 620

  Fly   528 VCTPTDRDVDHNL-----SYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVV 587
                   .|||.|     :.........||..:.|.:.:|.:.: |:...|:...:.:.....|.
Zfish   621 -------RVDHELMLKYFAAFEVFFEENLPRLFNHFKSYNLTPD-LYLIDWIFTLYAKSLPLDVA 677

  Fly   588 IRMWEA-CWSNYLTDYFHLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAMYMDGQLILRKARG 651
            .|:|:. |...   :.|.....|.|:.:|           :|:||.       ||          
Zfish   678 CRVWDVFCRDG---EEFLFRTGLGILRLY-----------EELLLQ-------MD---------- 711

  Fly   652 LLHQYRQLPKIP 663
            .:|..:.|.::|
Zfish   712 FIHSAQFLTRLP 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 56/258 (22%)
tbc1d12bXP_005169505.1 TPX2 407..>451 CDD:284337 12/58 (21%)
TBC 478..708 CDD:214540 57/273 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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