Protein Alignment TfIIB and PBRP

DIOPT Version :9

• Sequence 1: NP_001260349.1
• Gene: TfIIB / 34430
• FlyBaseID: FBgn0004915
• Length: 315
• Species: Drosophila melanogaster
• Sequence 2: NP_195383.1
• Gene: PBRP / 829817
• AraportID: AT4G36650
• Length: 503
• Species: Arabidopsis thaliana
• Alignment Length: 316
• Identity: 89/316 - (28%)
• Similarity: 136/316 - (43%)
• Gaps: 53/316 - (16%)

  Fly    33 CSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPL-LSGGDLSTIIGPG---------- 86
            ||.||.|:.:|             :........:...:.|| |...||.|...|.
plant    25 CSSCGRVMEER-------------QTQNHHLFHLRAQDTPLCLVTSDLQTAAQPSPEDEEDPFEP 76

  Fly    87 TG-------------------SASFDAFGAPKYQNRRTMSSSDRSLIS--------AFKEISSMA 124
            ||                   |.||....|...:.....||:..|..|        |:.:|..:|
plant    77 TGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSTSNSNSSTVVVDNLRAYMQIIDVA 141

  Fly   125 DRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKE 189
            ..:.|...|.:.|..||:.......|:.||.:|.|:|||..|.|:...|||.:||...:.:.:||
plant   142 SILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKE 206

  Fly   190 IGRCFKLTLKALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISV 252
            ||:..|:..:||:.|  ::..:.:..|.|||..|.|....|..||||.:..:.......|:|||:
plant   207 IGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISI 271

  Fly   253 AAAAIYMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDFKFTTP 308
            :|||||:|.|..:.:::|.||..|.|:.:||:|:.||.:..:...|.|.::....|
plant   272 SAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYTPAVP 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIB	NP_001260349.1	SUA7	22..289	CDD:224323	84/295 (28%)
PBRP	NP_195383.1	SUA7	<132..313	CDD:224323	63/180 (35%)
		CYCLIN	133..214	CDD:238003	28/80 (35%)
		CYCLIN	233..311	CDD:238003	32/77 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1405
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D729732at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11618
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	5	4.880