DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIB and AT3G10330

DIOPT Version :9

Sequence 1:NP_001260349.1 Gene:TfIIB / 34430 FlyBaseID:FBgn0004915 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_187644.1 Gene:AT3G10330 / 820195 AraportID:AT3G10330 Length:312 Species:Arabidopsis thaliana


Alignment Length:305 Identity:148/305 - (48%)
Similarity:193/305 - (63%) Gaps:20/305 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGD 78
            |..|.|  ::.|:.|||.:|||||||:....||..||||||:||....||.|||||.||||:.|.
plant     9 CKRHTE--VVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNPLLADGG 71

  Fly    79 LSTIIG-PGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLPKTIVDRANNLFK 142
            |:|:|. |...|..|.:....::|||.  |:.||.||.|||.|::||||:.|..||.||||.::|
plant    72 LTTVISKPNGSSGDFLSSSLGRWQNRG--SNPDRGLIVAFKTIATMADRLGLVATIKDRANEIYK 134

  Fly   143 QVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLK--ALET- 203
            :|.|.|:.:||:.||..:||||||||||..|||.||||:|:. .:||||||..:..:|  .||| 
plant   135 RVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETG 199

  Fly   204 ---SVDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASE 265
               .:..|...|||.|||:||.:.|...:||....:|:.|.||  .|||||:|||.||:.:|.|:
plant   200 QLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDI--RRSPISIAAAVIYIITQLSD 262

  Fly   266 HKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP------EDFK 304
            .|:..::|....|||:.|||.|||.:|||.:|:.|      ||.|
plant   263 EKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLK 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIBNP_001260349.1 SUA7 22..289 CDD:224323 135/274 (49%)
AT3G10330NP_187644.1 SUA7 6..297 CDD:224323 144/293 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 1.000 Domainoid score I2920
eggNOG 1 0.900 - - E1_COG1405
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1158
Inparanoid 1 1.050 258 1.000 Inparanoid score I988
OMA 1 1.010 - - QHG62181
OrthoDB 1 1.010 - - D729732at2759
OrthoFinder 1 1.000 - - FOG0002451
OrthoInspector 1 1.000 - - otm2694
orthoMCL 1 0.900 - - OOG6_101024
Panther 1 1.100 - - O PTHR11618
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2171
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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