Sequence 1: | NP_001260349.1 | Gene: | TfIIB / 34430 | FlyBaseID: | FBgn0004915 | Length: | 315 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112303.1 | Gene: | Gtf2b / 81673 | RGDID: | 619735 | Length: | 316 | Species: | Rattus norvegicus |
Alignment Length: | 316 | Identity: | 250/316 - (79%) |
---|---|---|---|
Similarity: | 281/316 - (88%) | Gaps: | 1/316 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MASTSRLDN-NKVCCYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPS 64
Fly 65 RVGGPENPLLSGGDLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINL 129
Fly 130 PKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCF 194
Fly 195 KLTLKALETSVDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYM 259
Fly 260 ASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDFKFTTPIDQLPQM 315 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TfIIB | NP_001260349.1 | SUA7 | 22..289 | CDD:224323 | 220/266 (83%) |
Gtf2b | NP_112303.1 | SUA7 | 14..290 | CDD:224323 | 223/275 (81%) |
Repetitive region | 124..200 | 64/75 (85%) | |||
Core promoter DNA-binding. /evidence=ECO:0000250|UniProtKB:Q00403 | 189..193 | 3/3 (100%) | |||
Repetitive region | 218..294 | 62/75 (83%) | |||
Necessary for TATA box-bound TBP complex formation. /evidence=ECO:0000250|UniProtKB:Q00403 | 244..316 | 58/71 (82%) | |||
Core promoter DNA-binding. /evidence=ECO:0000250|UniProtKB:Q00403 | 249..252 | 2/2 (100%) | |||
Core promoter DNA-binding. /evidence=ECO:0000250|UniProtKB:Q00403 | 283..286 | 2/2 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341969 | |
Domainoid | 1 | 1.000 | 123 | 1.000 | Domainoid score | I5483 |
eggNOG | 1 | 0.900 | - | - | E1_COG1405 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H1158 | |
Inparanoid | 1 | 1.050 | 499 | 1.000 | Inparanoid score | I1319 |
OMA | 1 | 1.010 | - | - | QHG62181 | |
OrthoDB | 1 | 1.010 | - | - | D381183at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002451 | |
OrthoInspector | 1 | 1.000 | - | - | oto97629 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101024 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11618 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2171 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |