Sequence 1: | NP_001260349.1 | Gene: | TfIIB / 34430 | FlyBaseID: | FBgn0004915 | Length: | 315 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_079962.1 | Gene: | Brf2 / 66653 | MGIID: | 1913903 | Length: | 420 | Species: | Mus musculus |
Alignment Length: | 300 | Identity: | 63/300 - (21%) |
---|---|---|---|
Similarity: | 108/300 - (36%) | Gaps: | 67/300 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 SPLIED--YRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTI 82
Fly 83 IGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLPKTIVDRANNLFKQVHDG 147
Fly 148 KNLKG---RSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLKALETSVDLIT 209
Fly 210 TADFMCRFCANL---------------DLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYM 259
Fly 260 ASQA-SEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKL 298 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TfIIB | NP_001260349.1 | SUA7 | 22..289 | CDD:224323 | 57/287 (20%) |
Brf2 | NP_079962.1 | SUA7 | 6..244 | CDD:224323 | 56/270 (21%) |
TF_Zn_Ribbon | 6..>37 | CDD:285471 | 11/23 (48%) | ||
Repetitive region | 72..157 | 15/88 (17%) | |||
Interaction with target DNA. /evidence=ECO:0000250|UniProtKB:Q9HAW0 | 108..114 | 0/5 (0%) | |||
Repetitive region | 173..249 | 15/76 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 316..387 | ||||
Required for the formation of a ternary complex with DNA and TBP, not required for interaction with TBP in the absence of DNA. /evidence=ECO:0000250|UniProtKB:Q9HAW0 | 358..364 | ||||
Required for interaction with TBP and formation of a ternary complex with DNA and TBP. /evidence=ECO:0000250|UniProtKB:Q9HAW0 | 366..420 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1405 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11618 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |