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Protein Alignment TfIIB and AT1G30455
DIOPT Version :10
| Sequence 1: | NP_476888.1 |
Gene: | TfIIB / 34430 |
FlyBaseID: | FBgn0004915 |
Length: | 315 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001117389.1 |
Gene: | AT1G30455 / 6240845 |
AraportID: | AT1G30455 |
Length: | 254 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 76 |
Identity: | 21/76 - (27%) |
| Similarity: | 31/76 - (40%) |
Gaps: | 9/76 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 206 DLITTADFMCRFCANL---DLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMA------S 261
:|:..:.|:.||...| .....|...||||........:..||.|..:..||:|.| |
plant 12 NLVDPSTFIPRFSNKLLKGAHNKQVVETATHIIASMKSNWMQTGRKPSGICGAALYTAALSHGGS 76
Fly 262 QASEHKRSQKE 272
.....:|::||
plant 77 DPPSFQRAEKE 87
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| TfIIB | NP_476888.1 |
SUA7 |
1..289 |
CDD:441015 |
21/76 (28%) |
| AT1G30455 | NP_001117389.1 |
CYCLIN_SF |
13..>74 |
CDD:477360 |
17/60 (28%) |
| BRF1 |
111..215 |
CDD:462250 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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