DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIB and gtf2b

DIOPT Version :10

Sequence 1:NP_476888.1 Gene:TfIIB / 34430 FlyBaseID:FBgn0004915 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_955991.1 Gene:gtf2b / 324823 ZFINID:ZDB-GENE-030131-3544 Length:316 Species:Danio rerio


Alignment Length:316 Identity:247/316 - (78%)
Similarity:281/316 - (88%) Gaps:1/316 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASTSRLDN-NKVCCYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPS 64
            ||||||.|: .||.|..||::.|:||||||||||.||||||.|||||||||||||||||:..|||
Zfish     1 MASTSRGDSLPKVQCPNHPDALLVEDYRAGDMICPECGLVVRDRVIDVGSEWRTFSNEKATKDPS 65

  Fly    65 RVGGPENPLLSGGDLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINL 129
            |||..:||||:||||:|:|..|||:||||.||..|||||||||||||::::|||||::|||||||
Zfish    66 RVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKEITTMADRINL 130

  Fly   130 PKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCF 194
            |:.|:||.|||||||::.|:||||||||.|||||||||||||||||||||||||:||||||||||
Zfish   131 PRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCF 195

  Fly   195 KLTLKALETSVDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYM 259
            ||.|||||||||||||.|||.|||:||.||..||.|||:||:||||:|:||||||||||||||||
Zfish   196 KLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYM 260

  Fly   260 ASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDFKFTTPIDQLPQM 315
            |||||..|::|||||||||||||||||||:|:||.||.|||.||||.||:|:|||:
Zfish   261 ASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLFPPDFKFDTPVDKLPQL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIBNP_476888.1 SUA7 1..289 CDD:441015 228/288 (79%)
gtf2bNP_955991.1 SUA7 3..292 CDD:441015 227/288 (79%)

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