Protein Alignment TfIIB and Brf1

DIOPT Version :9

• Sequence 1: NP_001260349.1
• Gene: TfIIB / 34430
• FlyBaseID: FBgn0004915
• Length: 315
• Species: Drosophila melanogaster
• Sequence 2: NP_001100231.1
• Gene: Brf1 / 299347
• RGDID: 1311158
• Length: 686
• Species: Rattus norvegicus
• Alignment Length: 310
• Identity: 59/310 - (19%)
• Similarity: 102/310 - (32%)
• Gaps: 102/310 - (32%)

  Fly    25 DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRV-------GGPENPLLSGG----- 77
            |...||.:|:.||.|:.|.:|  .||.:...|  ||...|.|       |..:.|.|.||
  Rat    17 DAARGDAVCTGCGSVLEDNII--VSEVQFVEN--SGGGSSAVGQFVSLDGAGKTPTLGGGFHVNL 77

  Fly    78 -------------------DLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSM 123
                               |.......|.|:|.....|.|                        :
  Rat    78 GKESRAQTLQNGILYFILADHGVGQDAGVGAAPHPPPGEP------------------------V 118

  Fly   124 ADRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRT------------- 175
            |....||       .:..:.:.||                   |:|...|||
  Rat   119 ATEPALP-------GHSLQLLQDG-------------------CKQASYPRTENGPCDCCLPLLD 157

  Fly   176 -FKEICAVSKISKKEIGRCFKLTLKALETSVDLITTADFMCRFCANLDL---PNMVQRAATHIAK 236
             ..::..:.:::...:|:.|.|..:.|..:...|....::.||...|:.   .:.|...|..:.:
  Rat   158 MLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQ 222

  Fly   237 KAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKEIGDIAGVADVTIRQ 286
            :.....:..||.|..:..||:.:|::..:.:|:.||:..:..|.:.|:|:
  Rat   223 RMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRK 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIB	NP_001260349.1	SUA7	22..289	CDD:224323	59/310 (19%)
Brf1	NP_001100231.1	SUA7	4..276	CDD:224323	59/310 (19%)
		TF_Zn_Ribbon	4..43	CDD:285471	11/27 (41%)
		CYCLIN	197..270	CDD:294043	15/72 (21%)
		BRF1	463..555	CDD:285040

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1405
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810