DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5188 and MAP1C

DIOPT Version :10

Sequence 1:NP_609401.2 Gene:CG5188 / 34428 FlyBaseID:FBgn0032247 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_172785.1 Gene:MAP1C / 837887 AraportID:AT1G13270 Length:369 Species:Arabidopsis thaliana


Alignment Length:284 Identity:140/284 - (49%)
Similarity:178/284 - (62%) Gaps:17/284 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GQVSPERFVPEEIKKPAYYFKNMPPGNTLGSPEIKSQVQIDA------MRLSGRLAARILRECGK 98
            |:|||...||:.|.:|.|....:       .|:|.|:.||..      ||.:..||||:|...|.
plant    94 GRVSPRLLVPDHIPRPPYVESGV-------LPDISSEFQIPGPEGIAKMRAACELAARVLNYAGT 151

  Fly    99 LATVGTTTDQIDAFAHERILESKAYPSPLRYAGFPKSICTSINNIACHGIPDDRQLADGDIINID 163
            |.....||::||...|:.|:|:.||||||.|.|||||:|||:|...||||||.|||..|||||||
plant   152 LVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINID 216

  Fly   164 VTVFLNGYHGDCSETFRVGNVDERGGF--LVEATKSCLDQCISLCGPGVEFNEIGKFIDRYCDEH 226
            |||:|:|||||.|.||..|.|||  ||  ||:.|:.||::.|::|..|..|.:|||.|..:.::.
plant   217 VTVYLDGYHGDTSRTFFCGEVDE--GFKRLVKVTEECLERGIAVCKDGASFKKIGKRISEHAEKF 279

  Fly   227 DLASIAAFIGHGIGSYFHGPPEILHYYNEIPGKMQPGMTFTIEPILSLGGAEIAVLQDGWTAISL 291
            ....:..|:|||:|..||..|.|.||.|:.||.|..|.||||||||::|..|.....|.||.::.
plant   280 GYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTIEPILTIGTTECVTWPDNWTTLTA 344

  Fly   292 DGARSAQFEHTILITETGTEILTR 315
            ||..:||||||||||.||:||||:
plant   345 DGGVAAQFEHTILITRTGSEILTK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5188NP_609401.2 MetAP1 79..315 CDD:238519 126/243 (52%)
MAP1CNP_172785.1 MetAP1 132..368 CDD:238519 125/237 (53%)

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