DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5188 and MAP1A

DIOPT Version :10

Sequence 1:NP_609401.2 Gene:CG5188 / 34428 FlyBaseID:FBgn0032247 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_182049.1 Gene:MAP1A / 819132 AraportID:AT2G45240 Length:398 Species:Arabidopsis thaliana


Alignment Length:290 Identity:135/290 - (46%)
Similarity:181/290 - (62%) Gaps:9/290 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TGKYEQIVSTGQVSPERFVPEEIKKPAYYFKNMP---PGNTLGS-PEIKSQVQIDAMRLSGRLAA 90
            ||..:|.    .:|.:|.||.||:||.:.....|   |.:.|.. .|||:..||..||.:.::|.
plant    98 TGPLKQY----PISTKRVVPAEIEKPDWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAR 158

  Fly    91 RILRECGKLATVGTTTDQIDAFAHERILESKAYPSPLRYAGFPKSICTSINNIACHGIPDDRQLA 155
            .:|....::...|.|||:||...||..:.:..|||||.|..||||.|||:|.:.||||||.|:|.
plant   159 EVLDAAARVIHPGVTTDEIDRVVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLE 223

  Fly   156 DGDIINIDVTVFLNGYHGDCSETFRVGNVDERGGFLVEATKSCLDQCISLCGPGVEFNEIGKFID 220
            ||||:|:||||...|.|||.:||:.||||||....||:.|..||::.|::..|||.|.|||:.::
plant   224 DGDIVNVDVTVCYKGCHGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFREIGEIVN 288

  Fly   221 RYCDEHDLASIAAFIGHGIGSYFHGPPEILHY-YNEIPGKMQPGMTFTIEPILSLGGAEIAVLQD 284
            |:.....|:.:.::.|||||..||..|.|.|| .|:..|.|:.|.||||||:::.||.......|
plant   289 RHATMSGLSVVRSYCGHGIGDLFHCAPNIPHYARNKAVGVMKAGQTFTIEPMINAGGWRDRTWPD 353

  Fly   285 GWTAISLDGARSAQFEHTILITETGTEILT 314
            ||||::.||.||||||||:|:||||.|:||
plant   354 GWTAVTADGKRSAQFEHTLLVTETGVEVLT 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5188NP_609401.2 MetAP1 79..315 CDD:238519 117/237 (49%)
MAP1ANP_182049.1 PLN03158 4..398 CDD:215607 135/290 (47%)

Return to query results.
Submit another query.