DRSC/TRiP Functional Genomics Resources

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Protein Alignment KdelR and ERD2

DIOPT Version :10

Sequence 1:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_564326.1 Gene:ERD2 / 839807 AraportID:AT1G29330 Length:215 Species:Arabidopsis thaliana


Alignment Length:215 Identity:117/215 - (54%)
Similarity:163/215 - (75%) Gaps:3/215 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65
            |||||||||:||:.:::||||||:.|:||||||.|:|.|:|:|:|||||||||.|||||||:||:
plant     1 MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYNSIMKI 65

  Fly    66 LFLATSGATVYLM--YVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLES 128
            :|:|:|.|.|:.|  :...:.:||.:.|:||.:::::.|.:|.|::|.:|||.||.|.||||||:
plant    66 VFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEVFWAFSIYLEA 130

  Fly   129 VAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYD-LIAIFAGVVQTVLYC 192
            |||||||.|:.|:|..:::|..|:..||:||.||::||:|||..|.|:. .||..:|:|||.||.
plant   131 VAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRYFTEDHFTRWIACVSGLVQTALYA 195

  Fly   193 DFFYLYITKVLKGKKLQLPA 212
            ||||.|........||:|||
plant   196 DFFYYYYISWKTNTKLKLPA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:459945 76/142 (54%)
ERD2NP_564326.1 ER_lumen_recept 28..171 CDD:459945 76/142 (54%)

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