DRSC/TRiP Functional Genomics Resources

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Protein Alignment KdelR and AT1G19970

DIOPT Version :9

Sequence 1:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_173426.1 Gene:AT1G19970 / 838586 AraportID:AT1G19970 Length:272 Species:Arabidopsis thaliana


Alignment Length:228 Identity:75/228 - (32%)
Similarity:125/228 - (54%) Gaps:22/228 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLY--NSVMK 64
            |:| .|.:..|...|.:|:.|:.|.::|||||.|:|.|.|:....|   |:.::|..:  ::.:.
plant    47 NLF-VASEAVHAVGIAVLIYKLTKEKTCAGISLKTQELTALFLAVR---LYCSFVMEFDLHTFLD 107

  Fly    65 VLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFT----VMEVLWTFSIY 125
            ...|.|:...||::..|.:.||..:.|:|.|.|:::|||:||..| |..|    :..:.|.|.:|
plant   108 SATLVTTLWVVYMIRFKLRPTYMEDKDNFAIYFVVIPCAVLSFFI-HPSTRHHIINRISWAFCVY 171

  Fly   126 LESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAG------ 184
            ||:|::||||.::..|...|..|:||:||||..|.|...:|:.:.:......|.|:.:|      
plant   172 LEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWILQVLDTRGRLLTALGSGLWPVMV 236

  Fly   185 ----VVQTVLYCDFFYLYITKVLKGK-KLQLPA 212
                :|||.:..||.|.|:..::.|: .|:||:
plant   237 LISEIVQTFILADFCYYYVQSLMGGQLVLRLPS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:395652 53/146 (36%)
AT1G19970NP_173426.1 ER_lumen_recept 72..215 CDD:395652 53/146 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5196
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1186269at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10585
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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