DRSC/TRiP Functional Genomics Resources

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Protein Alignment KdelR and ERD2B

DIOPT Version :10

Sequence 1:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_566758.1 Gene:ERD2B / 822095 AraportID:AT3G25040 Length:215 Species:Arabidopsis thaliana


Alignment Length:217 Identity:118/217 - (54%)
Similarity:161/217 - (74%) Gaps:7/217 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65
            |||||.|||::|:.::::|||||...:||||:|.|:|.|:|:|:.|||||:||::|||||:.||:
plant     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYNTSMKL 65

  Fly    66 LFLATSGATVYLMYVKF-KA---TYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYL 126
            :||.:|.:.|:  |:|: ||   |||...|:||..||::||.||:|:|:.:||.:|||||.|:||
plant    66 VFLGSSFSIVW--YMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEVLWTSSLYL 128

  Fly   127 ESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHY-DLIAIFAGVVQTVL 190
            |:|||||||.|:.||...:::|..|:|.||.||.||:|||:|||..|.|: ..|...||.|||:|
plant   129 EAVAILPQLVLLQRTRNIDNLTGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWITWIAGFVQTLL 193

  Fly   191 YCDFFYLYITKVLKGKKLQLPA 212
            |.||||.|.......|||||||
plant   194 YADFFYYYFLSWKNNKKLQLPA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:459945 79/144 (55%)
ERD2BNP_566758.1 ER_lumen_recept 28..171 CDD:459945 79/144 (55%)

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