DRSC/TRiP Functional Genomics Resources

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Protein Alignment KdelR and ERD2B

DIOPT Version :9

Sequence 1:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_566758.1 Gene:ERD2B / 822095 AraportID:AT3G25040 Length:215 Species:Arabidopsis thaliana


Alignment Length:217 Identity:118/217 - (54%)
Similarity:161/217 - (74%) Gaps:7/217 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65
            |||||.|||::|:.::::|||||...:||||:|.|:|.|:|:|:.|||||:||::|||||:.||:
plant     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYNTSMKL 65

  Fly    66 LFLATSGATVYLMYVKF-KA---TYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYL 126
            :||.:|.:.|:  |:|: ||   |||...|:||..||::||.||:|:|:.:||.:|||||.|:||
plant    66 VFLGSSFSIVW--YMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEVLWTSSLYL 128

  Fly   127 ESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHY-DLIAIFAGVVQTVL 190
            |:|||||||.|:.||...:::|..|:|.||.||.||:|||:|||..|.|: ..|...||.|||:|
plant   129 EAVAILPQLVLLQRTRNIDNLTGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWITWIAGFVQTLL 193

  Fly   191 YCDFFYLYITKVLKGKKLQLPA 212
            |.||||.|.......|||||||
plant   194 YADFFYYYFLSWKNNKKLQLPA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:395652 79/144 (55%)
ERD2BNP_566758.1 ER_lumen_recept 28..171 CDD:279187 79/144 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 168 1.000 Domainoid score I1179
eggNOG 1 0.900 - - E1_COG5196
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I1068
OMA 1 1.010 - - QHG53919
OrthoDB 1 1.010 - - D1186269at2759
OrthoFinder 1 1.000 - - FOG0000906
OrthoInspector 1 1.000 - - otm3499
orthoMCL 1 0.900 - - OOG6_101087
Panther 1 1.100 - - LDO PTHR10585
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X521
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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