DRSC/TRiP Functional Genomics Resources

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Protein Alignment KdelR and erd2

DIOPT Version :9

Sequence 1:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_596529.1 Gene:erd2 / 2540214 PomBaseID:SPBP8B7.22 Length:212 Species:Schizosaccharomyces pombe


Alignment Length:212 Identity:104/212 - (49%)
Similarity:152/212 - (71%) Gaps:0/212 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65
            |..|...||::|:.||.:||.::.|:::|:|:|.||.:||.:||:||||:||..|.|||..:|::
pombe     1 MTFFSALGDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTRYLNLFWRYKSLYYFLMRI 65

  Fly    66 LFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVA 130
            :|:|:.....|||.:..:.|||...|:||.|::|..||:|:|:....:|:..:||||||:|||||
pombe    66 VFIASESYICYLMLMTLRPTYDKRLDTFRTEYILGGCAVLALIYPTSYTISNILWTFSIWLESVA 130

  Fly   131 ILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFF 195
            ||||||::.|:||.||:|:|||||:..||.||:.:|:||..|......:||.||::|||||.||.
pombe   131 ILPQLFMLQRSGETESLTAHYLFAMCLYRGLYIPHWIYRIAVHKKVIGVAILAGIIQTVLYGDFA 195

  Fly   196 YLYITKVLKGKKLQLPA 212
            .:|...||:|||.:|||
pombe   196 VVYRRTVLQGKKFRLPA 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:395652 71/140 (51%)
erd2NP_596529.1 ERD2 1..212 CDD:227523 102/210 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 161 1.000 Domainoid score I977
eggNOG 1 0.900 - - E1_COG5196
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38236
Inparanoid 1 1.050 218 1.000 Inparanoid score I915
OMA 1 1.010 - - QHG53919
OrthoFinder 1 1.000 - - FOG0000906
OrthoInspector 1 1.000 - - oto100751
orthoMCL 1 0.900 - - OOG6_101087
Panther 1 1.100 - - LDO PTHR10585
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R403
SonicParanoid 1 1.000 - - X521
TreeFam 1 0.960 - -
1413.860

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