DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KdelR and erd-2.2

DIOPT Version :9

Sequence 1:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_498282.1 Gene:erd-2.2 / 175833 WormBaseID:WBGene00016195 Length:213 Species:Caenorhabditis elegans


Alignment Length:212 Identity:138/212 - (65%)
Similarity:178/212 - (83%) Gaps:1/212 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65
            |||||.:.|:||:.|||||||||||:|||:|||.:||||||:|:..||||||:||:||||:.||:
 Worm     1 MNIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKI 65

  Fly    66 LFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVA 130
            .|||.:.||||||:.||::||....|:||:|.|:||.|:|:|:|||:|...|:|||||||||:||
 Worm    66 TFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLINHDFAPFELLWTFSIYLEAVA 130

  Fly   131 ILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFF 195
            |||||||:..||.||.||:|||||||||||||:.||:|||..|.::|.|.:.||:||||||.|||
 Worm   131 ILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTEDYFDPIVVVAGIVQTVLYADFF 195

  Fly   196 YLYITKVLKGKK-LQLP 211
            |||:|:|::.:| ::||
 Worm   196 YLYVTRVVQTRKGMELP 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:395652 93/140 (66%)
erd-2.2NP_498282.1 ER_lumen_recept 28..169 CDD:366320 93/140 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158919
Domainoid 1 1.000 54 1.000 Domainoid score I7513
eggNOG 1 0.900 - - E1_COG5196
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I1578
Isobase 1 0.950 - 0.993157 Normalized mean entropy S306
OMA 1 1.010 - - QHG53919
OrthoDB 1 1.010 - - D1186269at2759
OrthoFinder 1 1.000 - - FOG0000906
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101087
Panther 1 1.100 - - LDO PTHR10585
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R403
SonicParanoid 1 1.000 - - X521
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.790

Return to query results.
Submit another query.