Protein Alignment SmB and SMB1

DIOPT Version :10

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_010946.3
• Gene: SMB1 / 856751
• SGDID: S000000831
• Length: 196
• Species: Saccharomyces cerevisiae
• Alignment Length: 228
• Identity: 57/228 - (25%)
• Similarity: 86/228 - (37%)
• Gaps: 76/228 - (33%)

  Fly     3 IGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPERE----- 62
            :..::::...::|::|::.||.|.:||...||||||||:|.:|.|.|..:::..|:..|:
Yeast     6 VAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDG 70

  Fly    63 -------EKRVLGFVLLRGENIVSLTVEGPP--PPEEGLPR------------------VPIPGA 100
                   ||||||..:||||.|:|..||..|  ..:|.|.|                  ...||.
Yeast    71 TTLNIKVEKRVLGLTILRGEQILSTVVEDKPLLSKKERLVRDKKEKKQAQKQTKLRKEKEKKPGK 135

  Fly   101 APGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRGVPRAPMMGAPPPGMIPGGM 165
            ...|.....                            :|.:...|.:.:      |......||.
Yeast   136 IAKPNTANA----------------------------KHTSSNSREIAQ------PSSSRYNGGN 166

  Fly   166 PSMPGNMGR---GAPPPMRGPPPSMIRGAPPPG 195
            .::..|..|   .|||..|       :..||||
Yeast   167 DNIGANRSRFNNEAPPQTR-------KFQPPPG 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	33/88 (38%)
SMB1	NP_010946.3	Sm_B	8..98	CDD:212464	33/89 (37%)