Protein Alignment SmB and lsm6

DIOPT Version :9

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_001165068.1
• Gene: lsm6 / 779701
• XenbaseID: XB-GENE-1007008
• Length: 80
• Species: Xenopus tropicalis
• Alignment Length: 67
• Identity: 15/67 - (22%)
• Similarity: 27/67 - (40%)
• Gaps: 10/67 - (14%)

  Fly    17 VRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENIVSLT 81
            |.:.|.....:.|.....|.:||:.|...||:...:.||.          .|...:||.|::.::
 Frog    20 VVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNK----------YGDAFIRGNNVLYIS 74

  Fly    82 VE 83
            .:
 Frog    75 TQ 76

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	15/64 (23%)
lsm6	NP_001165068.1	LSm6	7..74	CDD:212473	15/63 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910