Protein Alignment SmB and Lsm2

DIOPT Version :9

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_001004073.1
• Gene: Lsm2 / 684148
• RGDID: 1598536
• Length: 131
• Species: Rattus norvegicus
• Alignment Length: 60
• Identity: 14/60 - (23%)
• Similarity: 26/60 - (43%)
• Gaps: 19/60 - (31%)

  Fly     4 GKNNKMIQH----------LNYR---------VRIVLQDSRTFIGTFKAFDKHMNLILGD 44
            |:|.|::.|          |.|.         |.:.|::..:..||..:.|:::|:.|.|
  Rat    19 GENGKLVLHFRAGDQDFVRLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTD 78

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	13/59 (22%)
Lsm2	NP_001004073.1	LSm2	38..126	CDD:212472	10/41 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900