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Protein Alignment SmB and Snrpd3
DIOPT Version :9
Sequence 1: | NP_001188780.1 |
Gene: | SmB / 34426 |
FlyBaseID: | FBgn0262601 |
Length: | 199 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_080371.1 |
Gene: | Snrpd3 / 67332 |
MGIID: | 1914582 |
Length: | 126 |
Species: | Mus musculus |
Alignment Length: | 136 |
Identity: | 31/136 - (22%) |
Similarity: | 54/136 - (39%) |
Gaps: | 22/136 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTIGKNNKMIQHLNYRVRIVLQDSRT---FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPERE 62
|:||...|::... ...||..::.| :.|.....:.:||..:.:. .:..::.:|.:.|
Mouse 1 MSIGVPIKVLHEA--EGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNI----TVTYRDGRVAQLE 59
Fly 63 EKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQG 127
: |.:||..|..|.: .:.|...|:..:......|..||||....|.|..|. :|
Mouse 60 Q------VYIRGSKIRFLIL------PDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAA-RG 111
Fly 128 PVRGVG 133
..||:|
Mouse 112 RGRGMG 117
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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