Protein Alignment SmB and SNRPN

DIOPT Version :10

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_001365180.1
• Gene: SNRPN / 6638
• HGNCID: 11164
• Length: 244
• Species: Homo sapiens
• Alignment Length: 234
• Identity: 131/234 - (55%)
• Similarity: 154/234 - (65%)
• Gaps: 41/234 - (17%)

  Fly     2 TIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRV 66
            |:||::||:||::||:|.:|||.|.||||||||||||||||.||:|||||:.||:|.||||||||
Human     6 TVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 70

  Fly    67 LGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMP--INLSAVPAGLQGPV 129
            ||.|||||||:||:|||||||.:.|:.|||:.|||.|||:||.||||:|  :.:...||||.|||
Human    71 LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPV 135

  Fly   130 RGVGGPAQQHMAPMGRG------------------------------VPRA---PMMGAPPPGMI 161
            ||||||:||.|.|.|||                              |.||   |.:.||||||.
Human   136 RGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR 200

  Fly   162 PG-----GMPSMPGNMGRGAPPPMRGPPPSMIRGAPPPG 195
            |.     |:|...|. ..|.|||...|||..|||.||||
Human   201 PPMGPPIGLPPARGT-PIGMPPPGMRPPPPGIRGPPPPG 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	57/76 (75%)
SNRPN	NP_001365180.1	Sm_B	9..87	CDD:212464	58/77 (75%)