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Protein Alignment SmB and SNRPD1
DIOPT Version :9
Sequence 1: | NP_001188780.1 |
Gene: | SmB / 34426 |
FlyBaseID: | FBgn0262601 |
Length: | 199 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_008869.1 |
Gene: | SNRPD1 / 6632 |
HGNCID: | 11158 |
Length: | 119 |
Species: | Homo sapiens |
Alignment Length: | 137 |
Identity: | 35/137 - (25%) |
Similarity: | 52/137 - (37%) |
Gaps: | 30/137 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 KMIQHL----NYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLG 68
|:::.| :..|.|.|::.....||....|..||..| :..|:..||.:..:.|...:.|
Human 2 KLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHL----KAVKMTLKNREPVQLETLSIRG 62
Fly 69 -----FVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGP 128
|:|.....:.:|.|: ..|..:...|..:.|...|.|.||..|||
Human 63 NNIRYFILPDSLPLDTLLVD-VEPKVKSKKREAVAGRGRGRGRGRGRGRG--------------- 111
Fly 129 VRGVGGP 135
||.|||
Human 112 -RGRGGP 117
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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