Protein Alignment SmB and snrpe

DIOPT Version :9

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_001005147.1
• Gene: snrpe / 448738
• XenbaseID: XB-GENE-5922245
• Length: 92
• Species: Xenopus tropicalis
• Alignment Length: 92
• Identity: 26/92 - (28%)
• Similarity: 44/92 - (47%)
• Gaps: 24/92 - (26%)

  Fly     4 GKNNK----MIQHLNYRVRIVLQDSRTFI-----------GTFKAFDKHMNLILGDCEEFRKIRS 53
            |:..|    |:|.:|...|.:...||..:           |....||::|||:|.|.||.. :::
 Frog     5 GQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIH-LKT 68

  Fly    54 KNSKVPEREEKRVLGFVLLRGENIVSL 80
            |:        ::.||.::|:|:||..|
 Frog    69 KS--------RKQLGRIMLKGDNITLL 87

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	25/91 (27%)
snrpe	NP_001005147.1	Sm_E	11..89	CDD:212465	24/86 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910