Protein Alignment SmB and smb1

DIOPT Version :9

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_594151.1
• Gene: smb1 / 2542684
• PomBaseID: SPAC26A3.08
• Length: 147
• Species: Schizosaccharomyces pombe
• Alignment Length: 175
• Identity: 76/175 - (43%)
• Similarity: 95/175 - (54%)
• Gaps: 40/175 - (22%)

  Fly     8 KMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPER---EEKRVLGF 69
            ||:..||:.:.:..:|.|||:|...|||..|||:|.||:|:|.|:.:|  ||..   ||||:||.
pombe     5 KMVSLLNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQN--VPSNSVYEEKRMLGL 67

  Fly    70 VLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGG 134
            |:||||.||||:|:||||.:..:.    .....|||:.|.||||:|  |...|.||.|||||||
pombe    68 VILRGEFIVSLSVQGPPPMDPSMR----GSLLSGPGVARPAGRGIP--LGQAPVGLAGPVRGVG- 125

  Fly   135 PAQQHMAPMGRGVPRAPMMGAPPPGMIPGGMPSMPGNMGRGAPPP 179
                              ..||||          |...|||||||
pombe   126 ------------------YTAPPP----------PAGFGRGAPPP 142

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	39/76 (51%)
smb1	NP_594151.1	Sm_B	2..81	CDD:212464	39/77 (51%)
		Bindin	82..>147	CDD:251078	36/96 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	74	1.000	Domainoid score	I2522
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	129	1.000	Inparanoid score	I1434
OMA	1	1.010	-	-		QHG54849
OrthoFinder	1	1.000	-	-		FOG0002776
OrthoInspector	1	1.000	-	-		oto101626
orthoMCL	1	0.900	-	-		OOG6_101868
Panther	1	1.100	-	-	LDO	PTHR10701
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1254
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	10.900