Protein Alignment SmB and Snrpe

DIOPT Version :9

• Sequence 1: NP_001188780.1
• Gene: SmB / 34426
• FlyBaseID: FBgn0262601
• Length: 199
• Species: Drosophila melanogaster
• Sequence 2: NP_033253.1
• Gene: Snrpe / 20643
• MGIID: 98346
• Length: 92
• Species: Mus musculus
• Alignment Length: 92
• Identity: 28/92 - (30%)
• Similarity: 43/92 - (46%)
• Gaps: 24/92 - (26%)

  Fly     4 GKNNK----MIQHLNYRVRIVLQDSRTFI-----------GTFKAFDKHMNLILGDCEEFRKIRS 53
            |:..|    |:|.:|...|.:...||..:           |....||::|||:|.|.||.
Mouse     5 GQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI----- 64

  Fly    54 KNSKVPEREEKRVLGFVLLRGENIVSL 80
             :||...|::   ||.::|:|:||..|
Mouse    65 -HSKTKSRKQ---LGRIMLKGDNITLL 87

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	27/91 (30%)
Snrpe	NP_033253.1	Sm_E	11..89	CDD:212465	26/86 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810