DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SmB and Snrpb

DIOPT Version :9

Sequence 1:	NP_001188780.1	Gene:	SmB / 34426	FlyBaseID:	FBgn0262601	Length:	199	Species:	Drosophila melanogaster
Sequence 2:	NP_033251.1	Gene:	Snrpb / 20638	MGIID:	98342	Length:	231	Species:	Mus musculus

Alignment Length:	215	Identity:	136/215 - (63%)
Similarity:	156/215 - (72%)	Gaps:	23/215 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKR 65
            ||:||::||:||::||:|.:|||.|.||||||||||||||||.||:|||||:.||||..||||||
Mouse     1 MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKR 65

  Fly    66 VLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMP--INLSAVPAGLQGP 128
            |||.|||||||:||:|||||||.:.|:.|||:.|||.||||||.||||:|  :.:...||||.||
Mouse    66 VLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGP 130

  Fly   129 VRGVGGPAQQHMAPMGRG-------VPRAPMMGAP---PPGMIPGGMPSMPGNMGRGAPPP-MRG 182
            |||||||:||.|.|.|||       ...|.:.|||   |||.  ||.|.   .|||||||| |.|
Mouse   131 VRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGR--GGPPP---PMGRGAPPPGMMG 190

  Fly   183 PPPSM--IRGAP---PPGRG 197
            |||.|  ..|.|   |||||
Mouse   191 PPPGMRPPMGPPMGLPPGRG 210

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SmB	NP_001188780.1	Sm_B	5..82	CDD:212464	57/76 (75%)
Snrpb	NP_033251.1	Sm_B	5..83	CDD:212464	58/77 (75%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	163..231		30/53 (57%)
		Repeat-rich region	175..228		22/39 (56%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167831547
Domainoid	1	1.000	124	1.000	Domainoid score	I5497
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	251	1.000	Inparanoid score	I3202
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54849
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002776
OrthoInspector	1	1.000	-	-		otm43772
orthoMCL	1	0.900	-	-		OOG6_101868
Panther	1	1.100	-	-	LDO	PTHR10701
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1254
SonicParanoid	1	1.000	-	-		X2167
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.790