DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and STAM

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_003464.1 Gene:STAM / 8027 HGNCID:11357 Length:540 Species:Homo sapiens


Alignment Length:68 Identity:15/68 - (22%)
Similarity:30/68 - (44%) Gaps:8/68 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PAQRTNNDRFNTSKKPELLSKLEGSSDDVNAAILIPGENGVISVSDDKTVRVWLKRDSGQYWPSI 71
            |:|:|.....||     ::|.::|::....|.:..|......:.:   |..|.|.:::|...|.:
Human   452 PSQQTQAAYPNT-----MVSSVQGNTYPSQAPVYSPPPAATAAAA---TADVTLYQNAGPNMPQV 508

  Fly    72 CQY 74
            ..|
Human   509 PNY 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 15/68 (22%)
WD40 24..279 CDD:295369 10/51 (20%)
WD40 repeat 35..72 CDD:293791 7/36 (19%)
WD40 repeat 80..117 CDD:293791
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
STAMNP_003464.1 VHS_STAM 9..142 CDD:239625
SH3_STAM1 213..267 CDD:212897
GAT 306..377 CDD:281166
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..540 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141213
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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