DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdfy2 and gga3a

DIOPT Version :10

Sequence 1:NP_609400.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001082823.2 Gene:gga3a / 492643 ZFINID:ZDB-GENE-041111-218 Length:699 Species:Danio rerio


Alignment Length:91 Identity:21/91 - (23%)
Similarity:34/91 - (37%) Gaps:19/91 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAEIKPAQRTNNDRFNTSKKPELLSKLEGSSDDVNAAIL-IPGE--------NGVISVSDD--K 54
            |.:..|..:.|..|:       |||..|....|::..|:. :..|        ..::..|||  :
Zfish   229 MLSHFKTDESTQEDK-------ELLKDLYNDCDNLRTAVFRLATETEDDDSALGDILHASDDLSR 286

  Fly    55 TVRVWLKRDSGQ-YWPSICQYMPSGC 79
            .:..:.|...|| ....:....||||
Zfish   287 VINSYKKIVEGQTIVIDVPASTPSGC 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_609400.1 WD40 24..279 CDD:475233 16/68 (24%)
WD40 repeat 35..72 CDD:293791 8/48 (17%)
WD40 repeat 80..117 CDD:293791 21/91 (23%)
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
gga3aNP_001082823.2 VHS_GGA3 6..146 CDD:340805
GGA_N-GAT 167..204 CDD:465702
GAT_SF 212..297 CDD:470905 15/74 (20%)
Alpha_adaptinC2 577..691 CDD:197886
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.